Pseudomonas atacamensis: JWU58_16415
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Entry
JWU58_16415 CDS
T07336
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_16415
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JWU58_16415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
DUF6365
HTH_38
MerR
HTH_Tnp_ISL3
DUF3853
Motif
Other DBs
NCBI-ProteinID:
QSL85765
LinkDB
All DBs
Position
complement(3632289..3633302)
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AA seq
337 aa
AA seq
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MSNIREVARLAGVSVATVSRTLKSPERVLAPTRERVMAAVEQAGYRPNLMAVQFRSRRTG
NLVILVPTIANTFFARVISGAQQAAQAAGYRLLLCDTQGREELERQFAELVYAYQADGVI
QLRAYDPFENAPADADVPPIVNACEVLKAGRYPTISLDNVAAAKAMTEHLIALGHRRIGL
IKGSKNSPLTLDRLAGYEAALREAGIAFDEALICHGNFSLEAGFAGAQKMLALAERPSAL
FCENDEMAIGALKRIRQAGLRVPEDISVVGFDDIPMAAYCDPPLTTISQPAEAFGAKAVE
MLIALIEKQPLTERHVVLPFELTPRSSTARIDNLGKR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaatattcgcgaagtggctcggctggccggggtttccgtggcgacggtttcgagg
actttgaaatcgcccgagcgcgtgctcgcgccaacccgtgagcgcgtcatggctgcggtg
gagcaggccggctatcggccgaacctgatggccgtgcagtttcgctcgcggcgcaccggc
aatctggtgattctggtgccgaccatcgccaacaccttttttgcccgggtcatcagcggc
gcgcagcaagcggcgcaggcggccggttatcgcctgctgctgtgcgacacccagggccgg
gaagaactggagcggcaattcgccgagctggtatacgcctatcaggccgacggggtgatc
cagttgcgcgcctacgatcctttcgaaaacgccccggccgacgccgatgtgccgccgatc
gttaacgcctgcgaagtgctcaaggccgggcgttatccaaccatcagcctggacaacgtt
gccgccgccaaagccatgaccgaacacctgatcgccttgggacaccgacgcatcggcctg
atcaaaggctcgaaaaacagcccgctgactttggatcgattggcgggttacgaagcggca
ttgcgcgaagccgggattgccttcgatgaagcactgatctgccatggcaatttcagcctc
gaggccggttttgcaggcgcgcaaaagatgctcgcattggccgagcggccgagcgcgctg
ttctgcgaaaacgatgaaatggccattggtgcgctcaagcgcatccggcaggccgggctg
cgtgtgcccgaggatatttcagtggtgggtttcgatgacattccgatggctgcgtactgc
gatccgccgctgaccaccatctcgcaaccggccgaggccttcggggccaaggcggtcgag
atgttgattgcgctgatcgaaaaacagccgctgacagagcggcatgtcgtcttgccgttc
gagctgacgccacgcagcagcacggcccgcatcgacaacttgggcaagcgctaa
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