Pseudomonas atacamensis: JWU58_16525
Help
Entry
JWU58_16525 CDS
T07336
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_16525
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JWU58_16525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_6
AraC_binding
AraC_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSL90360
LinkDB
All DBs
Position
3654983..3655864
Genome browser
AA seq
293 aa
AA seq
DB search
MPEHLPGVAETTTPRPQIKDAVVQLFRHQTLLEPIRVPCVAEPLLVLVLAGTARVEERSL
GGEWQASQVTAGDFFLTNTREPYEMRWQTEGCEVFEVMHLYLGLGLIEQAAREAFGEQAG
AVTFVDVSGARDEQVSFILEQLRIELTQQRQPSALLVHSLAQALAIHLLRHYLDPDSNPR
RDNALPAYKLRRVIEAMNANLAEDFSLSHLAAIAGLSDYHFSRTFKRATGLSPSQYFIRL
RMSRARHLLLETAHSVIDIGLEVGYSSPSHFSQVFRREVGVTPSAYRDAPRGA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcatctgcccggtgttgcggaaacgaccacgccgcggccgcagatcaaggat
gcagtggtgcagctgttccgccatcaaaccctgcttgagccgatccgcgtgccgtgcgtg
gccgaaccgctgctggtgctggtattggccggcactgcccgggtcgaagaacgttcgttg
ggcggagaatggcaggcgagccaggtcacggcgggcgacttcttcctgaccaacacccgc
gaaccctatgaaatgcgctggcaaaccgaaggctgtgaggtcttcgaagtcatgcacctc
tacctcggtctgggcctgatcgaacaagcggcgcgcgaagcgttcggcgaacaggccggt
gcagtgacgtttgtcgatgtgtccggtgcgcgtgacgagcaggtcagcttcatccttgag
caactgcgcatcgaactcacacaacagcgccagcccagcgcactgctggtgcacagcctt
gctcaggcgttggcgatccatctgctgcgtcattacctcgacccggacagcaacccgcgc
cgcgacaacgccctgcccgcctacaaactgcgccgggtgatcgaagccatgaatgcgaat
ctggcggaggatttcagtctcagtcatctggccgccatcgccgggctgagcgactaccac
ttcagccgcaccttcaagcgcgccaccggtttatcgccctcgcaatacttcatccgcctg
cgcatgagccgcgcgcgtcatctgttgctggaaaccgcccacagcgtgatcgacatcggc
ctggaggttggctactccagccccagccacttttcccaggtgttccgccgtgaagtcggc
gtcaccccgagcgcctaccgcgatgcgccacgcggggcctga
DBGET
integrated database retrieval system
