Pseudomonas atacamensis: JWU58_16780
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Entry
JWU58_16780 CDS
T07336
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_16780
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JWU58_16780
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
FAD_binding_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QSL85835
LinkDB
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Position
complement(3712057..3712992)
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AA seq
311 aa
AA seq
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MTIKQIRAFLAVAHSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDEMRQRFSLQRGRVTLAAMPSFAGNLLPPILKSFRARYPNV
NVTVNDVINEQVLEMVRDRQVELGVAFAPMQSTSMTFTPLYVDRFVAVVPADSALAGRAD
IDWHTLLEQPFITLQRPSTVRVMLEEHLQARGMKLPVEFESHQLATVGRMVASGLGVSAV
PALCAGQMRELGAHCLTLNDSVERAIGVLTEPGNELSAAAQALFEILKAEDLQRQFDFPL
TPGARKQSAER
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaaacagatccgtgcctttctcgccgtggcccatagcctgagcttcgccgtg
gcctgcgagcgtctgcacctgtcgcagtcagcgctgagcctgaccatcaaagccctggaa
gaggggctgggagggcgcttgttcagccgcaacacgcgtaatgtcgcgctgaccccggaa
ggcgagtccctgctgccgctggcgcgccgcttgatcgccgactgggacaatgccgaagac
gagatgcgccagcgtttcagcctgcaacgcggacgcgtgacgctggcggcgatgccgtcg
tttgccggcaatctgctgccgccgattctcaagagcttccgcgcgcgttatccgaacgtc
aacgtcacggtaaacgacgtgatcaacgagcaagtgctggaaatggtccgcgatcgtcag
gttgaactcggtgtggcgttcgcgccgatgcagagcacatcgatgacgttcacgccgctg
tatgtcgatcgctttgtcgccgtggtgccggccgattcagcgctggccggtcgcgccgat
atcgattggcataccttgctggagcaaccgttcatcaccctgcagcggccatcgaccgtg
cgggtcatgctcgaagagcatttgcaggcgcgcggaatgaagttgccggtggagttcgag
agccatcaattggcgaccgtcgggcgaatggttgccagcgggcttggggtcagcgcggtg
ccggcattgtgcgcggggcagatgcgcgagctcggtgcgcattgcctgaccttgaatgat
tctgtcgaacgggcgattggcgtgttgaccgagccgggcaatgagctgtcggcggcggcg
caggcgttgttcgagattctcaaggctgaagatttgcagcgccagttcgatttccccctc
accccgggagcgcggaaacagagcgccgaacgctga
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