Pseudomonas atacamensis: JWU58_19250
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Entry
JWU58_19250 CDS
T07336
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pata
Pseudomonas atacamensis
Pathway
pata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWU58_19250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_19250
Transporters [BR:
pata02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JWU58_19250
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Paralog
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
ABC_ATPase
nSTAND1
AAA_25
AAA_22
RsgA_GTPase
AAA_16
AAA_29
nSTAND3
AAA_23
ORC-CDC6-like
AAA
AAA_5
NACHT
Rad17
NB-ARC
ATPase_2
nSTAND_NTPase5
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QSL86295
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All DBs
Position
4227181..4228170
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AA seq
329 aa
AA seq
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MSYVSVQHLQKSYAGTTVFSDIDCEINKGEFVTLLGPSGCGKSTLLRCIAGLTPVDGGKI
LLDGVDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSHKRVAEVLKL
VELHDFASRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQ
RELGLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPIDVFAAGFIGNYNLL
DAEAASKLLQRTINHRIAIRPEAIELSLDGELDAQIRSHSLLGNVIRYRVEARGVELVVD
VLNRSAADLHPDGQRLALSIDPTALCEVA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtcagcgtccaacacctgcagaaaagttatgccggcaccacggtgttcagc
gacatcgattgcgaaatcaacaaaggcgagttcgtcaccctgctcggcccgtccgggtgc
ggcaagtcgactttgctgcgttgcatcgccgggttgaccccggtggatggcggcaagatc
ctcctcgacggcgtcgacatcgtgccgttgagcccacagaaacgcgggatcggcatggtc
tttcagagctatgcactgttccccaacatgaccgtcgaacagaacgtcgccttcggcctg
cgcatgcaaaaggtcaacgccgatgacagccacaagcgcgtggcagaagtgttgaaactg
gttgaactgcacgacttcgccagccgctatccgcatcaactgtccggtggtcagtgccag
cgcgtcgccctcgcccgctcactggtaacccgcccgcgcttgttgctgctggatgagccg
ctgtcggcgctcgacgcacggattcgcaaacacctgcgcgaacagattcgtcagatccag
cgcgaactcggcctgaccacgatcttcgtcacccacgatcaggaagaagcgctgaccatg
tcggaccggattttcctgatgaatcagggaaagatcgtccagagcggcgacgccgaaacc
ctctacaccgcgccgatcgatgtattcgccgccggcttcatcggcaactacaacctgctc
gacgccgaggctgcgtcgaagctgttgcaacgaaccatcaaccaccgcatcgccatccgc
ccggaagccatcgaactgagccttgacggcgaactcgacgcgcagatccgcagccacagc
ctgctcggcaacgtcattcgctatcgcgtcgaagcacgcggcgtggaactggtggtcgat
gtgctcaaccgctccgccgccgatctgcatcccgacggacagcgcctggcactttccatc
gatccaacggccttgtgcgaagtagcttaa
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