Pseudomonas atacamensis: JWU58_19280
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Entry
JWU58_19280 CDS
T07336
Name
(GenBank) RHS repeat protein
Organism
pata
Pseudomonas atacamensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF6393
OCRE
Motif
Other DBs
NCBI-ProteinID:
QSL86300
LinkDB
All DBs
Position
complement(4234536..4239302)
Genome browser
AA seq
1588 aa
AA seq
DB search
MEAIARIEQELDSFPQTLSLYRKQLDHWLSRRADQISEAADLPSLVGMERIIRFGDSSTS
VSSSDDEFSSSVVQCPHGGLMQIESKFESVYDIPLGNISVDVVDVDSGKTAPVTLDQQGK
GEFRGDEGKFYRVLVHSAVTSSQVDELFKSYDGLTGELERWLRSEWQGFKPQWSQSVAIA
ASNGMLAGSWAAIEGVWDSLGLLSEILQDPGKFAERLGSGAAELIELAQTAPDLMEKLQL
LVSDEAAMCLLLRSASLWLDMLPPSEVAGKSAEVASMMIVQLIIDVLISVVLTFVGAGAG
IAYLTLRLADRATQLFNVAKRLVKALFSIVNAFIEYVDRYKAVAARGIAAGVKKGRMQLR
WDAKRNAMLKKYEPHDDAPDQSKNPNGDAADCVPKTCTNGCPVSMVTGEELLTLTDAVLD
GVLPFEFTRLYRSSAVEIDIGLGFGWSHTLAHRLAFDGDGVIWIDHENRRTRFPLPNVAR
PAIHNSLSRAAIFLGEEPEELILALAGDSARFYHFRAGRLTAISDVYGNRLTLQRDRSDR
IQRLDNGAGRSLLLRYDRAQLVAVEYQVFVQGEWITEQNLATYSFDARQRLLVATNAVGD
SERYDYDDHHVILQRQLTGGASFFWEWQREGKAARCMRHWASFSQMNTRYVWNDDDASVT
VHYVDGTEEVYVHDERARLVRQVAADGGEQLKAYDQQGRLIAEQDALGAVTEYRYDELGR
LIALIPPDDAPTSYEYRNGFLYKRCRGEAVWIYRRNAEGAVTEAVDPDGQVTHYYYNLRG
QLLSLRYPDSSRHRWVWNELGQLIEETLPDGGVRRFSYDALGRRITTQDEFGVVSRQEWD
AAGRLILTTSPTGSTRAYSYGAYGQITAERDELGRITRYEYDDDLHLVSRRINPDGTRVQ
YRYDHARLLLTEIENESGEKYRLDYTPTGLIRQETGFDGRRTAYAYDLNGHLLEKTEFGE
QGLSLVTQYQRDAAGRLRVKNLPDGAKIRYDYDRLGRLIGVDDGQNHPLAFEYDRQDRLI
TEHQGWGTLRYAYDACSQLKRMRLPDNSKLDYHYAKGGALSAIDLNGTPLTRHVYQSGRE
QQRQQGLLLSEYSYDDQGRLLAHAVGHRHASLYRRDYAYSANGNLEHIADSRHGQRTYGY
DALDRLIRVRHSRDELPESFAHDPAGNLLMQDRPGPAQIKGNRLLMQGDRHYDYDAFGNL
IRERRGHGQTLVTEYRYDCQHRLIGLTRPDGQTATYQYDAFGRRIRKTVDSAVTEFFWQG
EHLVAESSATQYRSFLYEPGTFRPLAMLDGKGPKKACPFYYQLDHLGTPQELTDYSGEIV
WSAQYDAYGKVAAVTLAGEDYLDQPLRFQGQYFDVESGLHYNRHRYYDPRLGRYLTPDPV
KLAGGLNQYQYVPNPTGWVDPLGLTSNCPPPNKPGCEVPGGIGGAKVDDGEPALPKMTAQ
ERRARIDELAEENAYRRLHEMENPQNGEHFLEKHGAQTTLRSQFERIMTGKNPTTGVIET
YTGGSHHGEPKIPSAATHFFSHRDQLNAIYRAKLIFSQTNLQTSRRPMDMGKIIGEGYTR
DGIYGQQRKAVVILRANGDTVTSYADFE
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatcgcgcgcatcgagcaggaactcgacagctttccgcaaacgctcagcctc
taccgcaaacagcttgatcactggctcagtcgcagggcggaccagatcagcgaggcagca
gacctgccatcgctggtgggtatggagcggatcatccgcttcggcgatagcagtacgtcg
gtcagcagcagcgacgacgaattttcctccagcgtcgtccagtgcccgcacggcgggctg
atgcaaatcgagagcaagttcgaatcggtctacgacatcccgctgggcaacatttccgtc
gatgtggtcgacgtggatagcggcaaaaccgcgccggtcacccttgatcagcagggcaag
ggcgagttcagaggcgacgagggcaagttctaccgcgttctggtccacagcgctgtcacc
tccagtcaagtcgacgagctgttcaaatcctacgacggtttgaccggcgaacttgagcgc
tggctgcgtagcgagtggcaaggtttcaagccgcagtggtcacagtcggtggcgatcgca
gccagcaacggcatgctcgccggcagttgggcggccatcgagggggtatgggacagcctc
ggtctgctctcggaaattctccaggatcccggcaagtttgccgagcgtctaggcagcggc
gcggctgagctgatcgagctggcacagaccgctccggatctcatggaaaagctgcagttg
ctggtcagtgacgaggcggcgatgtgcttgctgctacggtcggcgagtctgtggctggac
atgctgccgcccagcgaggttgccggcaagtctgctgaagtggcgtcgatgatgatcgtg
caactgatcatcgatgtcttgatcagcgtggtgctgacgtttgtcggagcgggggcgggg
atcgcttatctgacgctgcgtctggctgaccgcgcaacgcagctgttcaacgtcgccaag
cgtctggtcaaggcgctgttcagcatcgtcaacgcctttattgaatacgttgaccgctac
aaagccgttgccgcgcggggcatcgccgccggggtgaaaaagggccggatgcaattgcgc
tgggatgccaagcgcaacgccatgttgaagaaatacgagccacacgacgacgcgcccgac
caatcgaaaaaccccaacggcgacgccgccgattgcgtgcccaaaacttgtaccaatggc
tgcccggtgtcgatggtcaccggcgaagaactgctgaccctgaccgacgcggtgctcgac
ggcgtgttgcccttcgagttcacccgtttgtaccgcagcagcgcggtcgagatcgacatc
ggcctgggtttcggctggagccatacgctggcccatcggctggccttcgacggcgatggc
gtgatctggatcgaccacgaaaaccgccgcactcgttttcccctgcccaacgtcgcgcgc
ccggcgatccacaacagcctgtcgcgggcggcgatctttctcggcgaggaacccgaagaa
ctgattctggctctggccggcgacagcgcgcggttctatcactttcgcgccggacgactg
accgcaatcagcgatgtctacggcaatcgtctgaccctgcaacgcgatcgctccgatcgc
atacagcgtctggacaacggcgccggccgctcattgctgttgcgttatgaccgcgcgcaa
ctggtggcggtcgagtatcaggtgttcgttcagggcgagtggatcaccgagcaaaacctc
gccacctacagcttcgatgcccggcaacgcctgctggtcgcgaccaacgcggtgggcgac
agcgaacgctacgactacgacgaccaccacgtcatcctccagcgccagttgaccggcggc
gcgagcttcttctgggagtggcagcgcgagggcaaagccgcccgctgcatgcgccactgg
gcgtcgttctcgcagatgaacacccgttacgtctggaacgatgacgacgccagcgtgacc
gtgcattacgtcgacggcaccgaagaagtctacgtccacgacgagcgcgcgcggctggtg
cgccaggttgcggccgatggtggcgagcagctcaaggcctatgaccagcaggggcgcttg
atcgccgagcaggatgcattgggcgcggttaccgaatatcgctacgacgaactcggacgg
ctgatcgcgctgattccgccagacgatgcaccaacgtcctacgagtaccgcaacggtttt
ctctacaagcgttgccgtggtgaggcggtgtggatctaccggcgcaacgctgaaggcgcc
gtcaccgaagcggtcgatcccgacggccaggtcacccattactactacaacctgcgcggc
caattgctgtcgctgcgctatccggacagcagccgccatcgctgggtgtggaacgagctc
ggccagctcatcgaagaaactctgcccgatggcggcgtgcggcgtttttcctacgatgcg
ctgggccggcggattaccacccaggacgaatttggtgttgtcagccgtcaggagtgggac
gcggccggccgactgatcctgacgacttctcctacgggcagcacgcgcgcctacagctac
ggcgcctacgggcagatcaccgctgagcgcgacgagctcgggcgtatcacccgctatgaa
tatgacgatgacctgcacctggtctcgcggcggatcaatcctgacggcacccgcgtgcag
taccgctatgaccatgcgcggctgttgctgaccgagattgaaaacgaatcgggcgaaaag
taccgactggattacacgccgaccggattgatccgacaggaaaccgggtttgatgggcgg
cgcacggcttatgcctacgacctcaatggtcatttgctggaaaagactgaattcggcgag
cagggtttatcgctggtcacccaataccagcgcgacgcggctggaaggttgcgggtcaag
aacctgcccgatggcgccaagatccgctacgactacgaccgcctcggccgattgatcggt
gtcgatgacggccagaaccatccgctggccttcgagtatgaccgtcaggatcgcttgatc
accgagcatcagggctggggcaccttgcgctacgcctatgacgcctgcagccagctcaag
cggatgcgcctgccggacaacagcaagctcgactatcactatgccaagggcggtgcgctg
agcgccatcgacctcaacggcacgccgctcacgcgccacgtctaccagtccggtcgcgaa
cagcaacgccagcaaggcttgctgctcagcgaatactcctacgacgatcagggccgcttg
ctcgcccacgctgtaggtcatcgccacgcttcgctgtaccgccgcgattatgcctacagc
gccaacggcaatctcgagcacatcgccgacagccgccacggccagcgcacctacggctac
gacgccctcgaccggttgatccgcgtacgccactcgcgcgacgaactgcccgaatccttc
gcccacgacccggccggcaacctgctgatgcaggaccgccccggccccgcgcagatcaag
ggcaaccgcctgttgatgcagggcgaccgccattacgactacgacgccttcggcaacctg
atccgcgaacgccgtggccacggccagaccctggtcaccgaataccgctacgactgccag
caccgcctgatcggcctgacccgcccggacggccagaccgccacttatcaatacgacgcc
ttcggccggcgcatccgcaaaaccgtcgacagcgccgtcaccgaattcttctggcaaggc
gagcacctcgtcgccgaaagcagcgccacgcaataccgcagcttcctctacgaacccggc
accttccgcccactggcgatgctcgacggcaaaggcccgaaaaaagcctgcccgttctac
taccaactcgaccacctcggcaccccgcaggaactgaccgactacagcggcgaaatcgtc
tggtccgcgcaatacgacgcctacggcaaagtcgccgccgtcaccctcgctggcgaggat
tacctcgaccaaccgctgcggtttcaggggcagtatttcgatgttgaaagtgggctgcac
tacaaccgccatcggtattacgacccgaggcttgggcggtatctgacgccggacccggtg
aagctcgcgggtgggttgaatcagtaccagtacgtgccgaatccgacggggtgggtggat
ccgttgggtttgacgtccaattgcccgccgccgaataagcctgggtgtgaggttccgggt
gggattggtggggctaaagtggatgatggtgaacctgcgctgccgaagatgacggctcag
gagcgtcgggcgaggattgatgaattagctgaagaaaacgcataccgacgtttgcatgaa
atggagaatccacaaaatggagagcattttctggaaaagcacggcgcccaaacaacacta
cggtcgcaatttgaaaggatcatgacaggaaaaaatccaacgactggcgttatagagacc
tacaccggtggatcgcaccatggagaacctaaaattccaagcgcggctactcattttttc
agccatagagatcagctgaacgctatctatagagcaaaacttatattcagtcagactaat
cttcaaacatctagaaggcctatggacatgggaaagataattggggaaggttataccaga
gacggcatttatgggcagcagaggaaagccgtggttattctgagagctaatggcgatacc
gtgacttcatatgcggattttgaatga
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integrated database retrieval system
