Pseudomonas atacamensis: JWU58_20805
Help
Entry
JWU58_20805 CDS
T07336
Name
(GenBank) DegQ family serine endoprotease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata01503
Cationic antimicrobial peptide (CAMP) resistance
pata02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWU58_20805
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
JWU58_20805
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pata01002
]
JWU58_20805
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pata03110
]
JWU58_20805
Enzymes [BR:
pata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
JWU58_20805
Peptidases and inhibitors [BR:
pata01002
]
Serine peptidases
Family S1: chymotrypsin family
JWU58_20805
Chaperones and folding catalysts [BR:
pata03110
]
Other chaperones and cochaperones
DegP / HtrA
JWU58_20805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
PDZ
Trypsin
PDZ_Tricorn
Peptidase_S46
PDZ_1
PDZ_4
Motif
Other DBs
NCBI-ProteinID:
QSL86594
LinkDB
All DBs
Position
complement(4559001..4560434)
Genome browser
AA seq
477 aa
AA seq
DB search
MSIPSLKSYLSIFATVLLLGQAVPAAQAADLPDFTQLVEQASPAVVNISTTQKLPDRRVN
QQMPDLEGLPPMLREFFERGMPPQQRSPRGDGRQREAQSLGSGFIISPDGYILTNNHVIA
DADEILVRLADRSEMKAKLVGTDPRSDVALLKIEGKDLPVLKLGKSQDLKAGQWVVAIGS
PFGFDHTVTQGIVSAVGRSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGINSQIYT
RSGGFMGVSFAIPIDVAMDVSNQLKSGGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALV
AQIQDDGPAAKGGLQVGDVILSMNGQPIVMSADLPHLVGALKAGAKANLEVIREGKRKNV
ELTVGAIPDEDKELAGLPKSGAESSSNRLGVAVGELTAEQKKTYDLKGGVVIKEVQDGPA
ALIGLQPGDVITHLNNQAIGSAKEFTDIAKALPKNRSVSMRVLRQGRASFITFKLAE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataccaagtttgaagtcttacctttccatcttcgccaccgtgctgttgctcggt
caggcggtccctgctgcgcaagcggccgatctgcctgatttcacccaattggtcgaacaa
gcgtcgccagcggtggtgaacatcagtaccacgcagaaactgccggaccgtcgggtcaac
cagcagatgccggatctggaaggcctgccaccgatgctgcgcgaattcttcgagcgcggc
atgccgccccagcagcgctcgccacgtggcgatggacgccagcgtgaagcgcaatcgctg
ggttcggggttcatcatttcgccggatggctacatcctcaccaacaaccacgttatcgcc
gatgctgacgaaatcctcgtccgtctggctgaccgcagtgagatgaaagccaagctggtc
ggcaccgacccccgctctgacgtggcgttgctgaaaatcgaaggcaaggatctgccggtg
ctcaagctcggcaagtcccaggacctgaaggccggccagtgggtcgtcgcgatcggttcg
ccatttggctttgaccacaccgtgacccaaggcatcgtcagcgccgtcggtcgtagcctg
ccaaacgaaaactatgtgccgttcattcagaccgacgtgccgatcaacccgggcaactcc
ggtggcccgctgttcaacctgaacggtgaagtggtcggcatcaactcgcagatctacacc
cgctccggtggcttcatgggcgtgtctttcgccattccgatcgacgtggcgatggatgtt
tccaatcagctcaaaagcggtggcaaagtcagccgcggctggctgggcgtggtcattcag
gaagtgaacaaggatctggccgagtcgttcggtctggacaagccagctggcgcgctggta
gcgcagatccaggatgacggccctgcggccaagggcggcctgcaggttggcgacgtgatc
ctgagcatgaacggtcagccgatcgtcatgtccgccgatctgccgcatctggtcggcgcg
ctgaaggctggcgccaaagccaatctggaagtgattcgtgaaggcaagcgcaagaacgtc
gagctgaccgtcggcgcaatcccggacgaggacaaagagctggcaggtctgccgaaatcc
ggcgctgaaagcagcagcaaccgcctcggtgttgcggtcggtgaattgaccgccgagcag
aagaaaacctacgacctcaaaggtggtgtggtgatcaaggaagtgcaggacggtcctgcg
gccctgatcggtctgcaaccgggtgacgtgatcacccacctgaacaatcaagccatcggc
tcggccaaggagttcaccgacatcgccaaggcgttgccgaagaaccgttcggtgtcgatg
cgcgtgctgcgtcagggccgtgccagcttcatcaccttcaaactggctgaataa
DBGET
integrated database retrieval system
