Pseudomonas atacamensis: JWU58_20880
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Entry
JWU58_20880 CDS
T07336
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWU58_20880 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pata03400
]
JWU58_20880 (ung)
Enzymes [BR:
pata01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JWU58_20880 (ung)
DNA repair and recombination proteins [BR:
pata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JWU58_20880 (ung)
Prokaryotic type
JWU58_20880 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSL86609
LinkDB
All DBs
Position
complement(4574371..4575066)
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AA seq
231 aa
AA seq
DB search
MTADDRIKLEPSWKEALRAEFDQPYMAELRSFLQQERASGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
EQGVLLLNTTMTVERANANAHKDKGWQHFTDRIIEVVSERQPHLVFMLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPIDWRLPPLA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgaccgtatcaaactcgaaccgagctggaaggaggcactgcgtgctgag
ttcgaccagccttacatggcagagttgcgcagctttctgcagcaggagcgggcatccggc
aaggagatctatccgccgggaccgatgattttcaatgccctgaactcaacgccgctggac
aaggtgaaagtggtgattctcggccaggacccttaccacggcccgggccaggcccacggt
ctgtgcttctcggtgcaaccgggcgtgccggcaccgccgtcgctggtcaacatctataaa
gagttgaaacgcgacctcaatatcgacattcccaaccacggctacctgcagagctgggcc
gaacagggcgtgctgctgctcaacaccaccatgacggttgagcgcgccaacgccaacgcg
cacaaggacaagggctggcaacacttcaccgaccgcatcattgaggtggtcagcgagcgg
cagccgcatctggtgttcatgctctggggcgcccatgcgcagagcaagcagaagctgatc
gacgcgaccaaacacctggtgctgacctcggtgcatccgtcgccgttgtcggcctatcgg
ggttttttgggctgtgggcatttcagccggaccaacaagtttctcgaacagaatggcgaa
acgccgatcgactggcgcttgccacctctcgcctga
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