Pseudomonas atacamensis: JWU58_20890
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Entry
JWU58_20890 CDS
T07336
Name
(GenBank) calcium-binding protein
Organism
pata
Pseudomonas atacamensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
QSL86611
LinkDB
All DBs
Position
complement(4576376..4581907)
Genome browser
AA seq
1843 aa
AA seq
DB search
MSYVFSDMEKSEIFNAANICKGMRLRSKQLQYDALKLAGASCAPLYQKLFDIIGEKVSDV
AAADKEAGEVLKSARLWLAVAIDANGGNGAYSALIRGYTSRQGELRLNTIFSEDLMQLSS
NQVAVNFINTLINGSLAGQLAPWTVPSISQIAEIDASAIGEALFKEVCGEDDTAVKRNAG
WSGTVGFSLLGGKPPYETWRLISAGDPNTEDDGPPTQAKPNRLDDYKNILFAIDAYSVGL
RAAISNFGINPLQSLLSVVPEQINIALASGSVNPLIRHVVKGTPVAAVVELMLRYGQNEF
LDMCKRTYDGDSAAIPTTNDTFASNAYAFFSAFSPEQSQSIVTRTISEFGNADAWAKLAG
EATPLGVALRNSLQQLSEVVIERADGYPDRNLELYDPHTGEGFITAQWLADRAQMLARLI
ARTQGSFGEHSLQKFSYSDLASGKQAPMTTGVLNPLAMFGDDGGRSFAGGANADHLYGGV
GNDSIHGMAGHDVIEGGRGNDSLTGGDGNDELYGMAGDDVLIGEKGNDSLIGGEGNDRYE
FASGDGIDEILDANADGQLWINGAPIPQLKRRAPLSNIWSTEDRSITLTLVEHTLNIKYG
QSDLVVIKNFQPGMLGIRLPEYEGQPLTAADLTLQGDWKAKDTDPSVPGDQPSFDELGNV
VLLPQVKQRNKADVLYGSAADDVILGLGGSDRLFGKAGDDRLFGDKQTTLEKAMADGDAK
GKASRGDWLDGGQGDDLLIGTASRDVLLGGNDRDTLIGGAGDDVLSGDETTGALEQGWAV
KRADVPIARGVTSHRAVYSKASINSAPEGGDDVLYGQGGKDIINGGWGEDLLDGGADDDF
LKGDQGDDTLTGGSGNDVMLGDNLDWGGGLPSRHHGNDVLDGGSGDDSLGGNGGSDALYG
GPGNDILQGDDGVLDGVEGDAAHFFGDDLLDGGSGDDTLWGGAGDDLLFGGEGNDDLIGD
SPEHPVRYHGNDFLDGGAGDDTLRGMGGADTLAGGAGADFLDGDVSDLQPGGSNNDVLQG
GEGNDTLQGGFGADTLDGGAGDDILAGDYENSAEAEHNADYLLGGSGNDTLLGGGGNDTL
LGGEGTDYLRGDSGDNVFDGGPGADVLDGMDGADIYYFGAGDGLDIVTDAGGRNIIRFGS
GFCAQSLKADVIDATVGTVLRLANGTGDAILIKNHEKWKDSTFSFSDGGVLDYADILRKT
LPPIEMSEPPVPEPVTASAAPESKVEDPVQPDDVTAAAQGPVASVQTLNWTDEFLAQTKS
KRSARKHATGFTLNEQGVWVRSHVTTSDTGYTTHTELSEDSVEAGTLSETPPWMKADAGQ
AVVSERQSTTTTRVEHKPVKAEGAVASSSQAPRYYRSGSANGFSFNTGDVLVEDRKQSGA
LEGWYVYPAASFSSGATVPKAFRWDVTTETIKRKIVHGDDAGGRVNVEVENVFHGGAGDD
LIVAYAGSPLDYGTVGDRTPGAFLSAGAGDDTLLGSEGADYLLSGSGDDWLYGEDGADTY
VVQAHAGATTTIADVLNPVFHRAEVGVAGWKDEYGLIDQDTVVLPAGAQRDALQLSWGAA
LIETTHVELEPNPARAAYRNPPRAKMLHPTLDIQWGGTQKVRIVLPHNGELEGAGIELVK
FADGSVASLKQLLESSQLGPAPETFRTGVIVNHPTRSTSLRDGRALPLVGGRGNDTISGA
GEIRGMHGDDVLTGSLGEDLLLGGPGNDTLTGGAGNDLYRYDGLGRDVIINNGGGRDGID
FSERRLTIDNLKFHRERDDLVIVVDYGMAPKIRVSSHFAAGESAIGFIRVSEGTAIQDYS
ATQIAERLHPLPPLRDVEDILIKGDDAAQRAIKEIIEFYELNV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgtattcagcgatatggaaaaatcagagattttcaacgcagcaaatatttgc
aaaggaatgaggctgcgctcaaaacaacttcagtacgatgcactgaaattagcaggggca
agctgcgcacccctgtaccagaagctattcgacattattggtgaaaaagtttctgacgtt
gcagctgccgataaagaggctggagaggtgctgaaaagcgccagactctggcttgccgtg
gccattgatgccaacggtggaaacggtgcctactctgccctgattcgtggttacacctca
cgccagggtgaactcagactgaatacaattttcagtgaagacctgatgcagctttcatcc
aaccaggttgccgtcaacttcatcaataccctgatcaacggatcccttgccggtcaactg
gcaccctggaccgtgccgtcaatcagccagatcgcagaaatcgacgccagcgcgattggc
gaggcgctgttcaaggaggtttgcggggaggacgataccgccgtgaaacgcaatgccggc
tggtctggaacagtcggattcagcctgctgggcggtaaacctccctatgaaacctggaga
ctgatttctgctggcgacccgaatacggaagatgacggcccacccactcaggcaaaaccc
aaccggctcgacgactataaaaacattctcttcgccatcgacgcctacagcgtcggcctg
cgagcggcgatcagcaatttcggcatcaatccactgcaaagtctgctctcggtcgtaccc
gagcaaatcaacatcgcgctggccagtggcagtgtgaatccgctgattcggcatgtagtc
aaaggcacgcctgttgccgccgtggtcgagctgatgttgcgctacggccagaacgaattt
ctcgacatgtgcaagcgcacttacgacggcgattctgctgccatacccaccaccaacgac
accttcgccagcaacgcttacgccttcttctcggcattctccccagagcagtcgcaaagc
atcgtcacccggacaataagcgagttcggcaatgccgatgcatgggcaaaactggcaggc
gaggcgacgccgctcggtgtggcgttgcgcaactctttgcagcaactcagtgaagtcgtc
atagaacgagccgacggttatcccgatcgcaacctcgagctttacgatccgcacactggc
gaaggttttatcaccgcgcagtggctggcggatcgagcgcaaatgctggcgcggttgatt
gcccgaacccagggctcgtttggcgaacactcgctgcagaagttttcctactccgatctc
gcctcaggcaaacaggcgccgatgaccaccggagtgctgaacccgctggccatgttcggt
gatgacggtggacgatctttcgccggcggcgcaaatgccgatcatctgtatggcggcgtg
ggcaatgactcgatccatgggatggccggtcacgatgtcattgaaggtggtcgcggtaac
gactcgctaaccggaggtgacggcaatgatgagttgtacggaatggccggtgacgatgtt
ctgatcggagaaaagggtaacgactccttgatcgggggcgaaggcaacgaccgttatgaa
ttcgctagcggcgatggcatcgacgagattcttgatgccaacgccgatgggcaactgtgg
atcaacggcgcgccgattccccaactcaaacgccgcgcgcctctgagcaatatctggtct
accgaggatcggtccatcaccctgacgcttgttgaacacaccctcaacatcaaatatggc
cagagcgatctggtggtcatcaagaactttcagcccgggatgcttggcatccgcctccct
gaatacgaggggcagccgctcactgctgcggatttgacgcttcagggcgactggaaagcc
aaagacacagatccgagtgtccccggcgatcagccatcctttgatgaactgggcaacgtg
gtgctgctgccccaggtaaaacagcgcaacaaggccgacgtactttacggttccgccgca
gacgacgtcattctcggcttgggtggttctgatcgattgttcggcaaggctggagacgat
cggttattcggcgacaagcagacgacgctcgaaaaagctatggccgacggtgacgccaag
ggcaaggcaagtcgcggagactggctcgacggcgggcaaggtgacgatttgcttatcggt
acggcatcccgagatgttctgctcggtggtaatgaccgggataccttgatcggcggtgct
ggcgacgatgtgttatccggagacgaaaccaccggtgcactggaacaaggttgggcggtc
aaacgcgctgacgtccccatagctcgcggtgtaaccagtcaccgagcggtctattcaaag
gcctcgataaacagtgcgcccgagggcggtgacgacgtgctgtacgggcagggcggcaag
gacattatcaacggcggctggggtgaggacctgcttgacggcggagctgacgacgatttt
ctcaaaggcgatcaaggtgacgacaccctgaccggtggcagcggcaacgacgtaatgctc
ggcgacaacctcgattggggcggtgggctacccagcagacaccatggcaacgatgtgctg
gacggcggcagtggtgatgattcactcggcggtaacggtggcagcgacgctttgtatggc
ggccctggcaacgacattttgcagggtgatgacggcgtactggacggcgtcgaaggcgat
gccgcgcatttttttggcgatgatctgctggacggtggctccggcgatgacacgctctgg
ggcggcgctggcgatgatctgctcttcggcggcgaaggtaatgacgatctgatcggcgat
agccctgagcatccggttcgctatcacggcaacgactttctcgatggcggcgcgggggat
gacaccctgcgcggcatgggcggcgcggatacgctggcgggtggcgcaggggcggatttt
ctcgatggcgatgtgtctgacctgcagccgggcggaagcaacaatgacgtgcttcagggc
ggcgaaggaaacgatacgttacagggtggtttcggtgccgacacgctggacggcggtgcg
ggtgacgacattcttgccggcgattacgaaaacagcgctgaggccgagcacaatgccgat
tatctgctcggtggctcaggtaacgacacgctgctcggaggtggtggcaacgacaccctg
ctgggcggggaaggcacggactaccttcgcggcgattctggcgacaacgtgtttgatggc
ggtcccggtgctgacgtgctggatggcatggatggcgctgacatctactatttcggcgct
ggcgacggcctggatatcgtcaccgatgccggcggccgcaacatcatcaggttcggttca
gggttttgcgcgcaaagcctgaaggccgacgttattgacgctaccgtcggcacggtgttg
cgactggccaatggcacgggcgacgcgatactcatcaagaatcacgagaagtggaaggat
tccacattcagtttcagcgacggcggggtactggattacgcagatatcctgcgcaaaaca
ttgccaccgatagagatgtccgagccacccgtaccggaacctgtcaccgcctcggcagcc
cctgaaagcaaagttgaggatccggttcagccagacgatgtcaccgctgcggcgcaaggc
ccggtggcgtctgttcaaacgctcaactggaccgatgagttcctcgcgcaaaccaagtca
aaacgctccgcccgcaaacacgccacaggttttaccttgaatgagcaaggcgtttgggtg
cgcagtcatgtcaccaccagcgacaccggttacaccactcacaccgagctgagcgaggac
agcgtcgaagcggggacactgtctgaaacgccgccatggatgaaggcggatgcagggcaa
gccgtagtcagtgaaaggcagtcgacaaccacaacccgtgtcgaacataaaccggtgaaa
gccgagggagcagtcgcctcctcaagtcaggcgcctcgctattatcgatccggctcggcc
aacgggttttccttcaatacgggcgacgtattggttgaggaccgaaagcaatccggcgcg
cttgaaggctggtacgtctatccggcggcgagcttcagttcgggcgctacagtgcccaag
gcgtttcgctgggatgtcacaactgaaacgatcaaacgcaaaatcgtccatggcgacgat
gccggcgggcgagtcaacgttgaagtggaaaacgttttccacggcggcgcgggagacgat
ctgatcgtcgcttatgcaggctccccacttgactacggcactgtcggcgacagaacaccg
ggcgcgtttttatccgcaggtgcaggtgacgataccttgctcggctccgagggcgccgac
tatctgctcagcggatcgggtgatgactggctctacggcgaagacggcgccgacacctac
gtcgtgcaagcgcatgccggggcgacaaccacgattgcggacgtgctcaaccctgttttc
caccgagcagaagttggcgtagcggggtggaaagacgagtacggattgatcgatcaggac
acggtcgttcttccagcaggtgcgcagcgcgatgcactgcaattgagctggggtgctgcg
ctgatagagaccacccatgtcgagctcgagcccaacccggctcgcgcggcttaccgcaac
ccgccgcgagcaaaaatgctccatccgacgctcgatatccaatggggcgggacgcaaaaa
gtccgcatcgtcttgccccacaacggtgaacttgagggggccggtattgagctcgtcaag
ttcgccgatgggtcggtcgcaagtttgaagcagctcctggaatcaagtcagctcggccct
gcgcccgagacttttcgtacgggtgtcatcgtcaaccatcccacccgttcaacttccttg
cgagacggacgagcgctgccactcgtgggcggtcgcggcaacgacacgataagcggcgcg
ggggagatccgaggcatgcacggggatgacgtgctcacgggcagcctcggtgaggatctg
ctgctgggtgggccgggcaatgacacgctaaccggcggcgcgggaaatgatctctaccga
tacgatggcctcggcagagacgtgatcatcaacaacggaggcggccgggacgggatcgat
ttttccgaacgcaggctgacgatcgacaacctgaaatttcaccgtgagcgcgatgatctg
gtgatcgtggtcgattacggcatggcgccgaaaatccgggtttccagtcattttgccgct
ggtgaaagcgctattggcttcataagagtcagcgaaggaacagcgattcaagactacagc
gcgacgcagattgccgagcgtctgcacccgcttccgccactgagggatgtcgaggatatt
ttgataaagggcgacgatgcagcgcagcgggcaatcaaggaaatcattgagttctacgaa
ctgaatgtctga
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