Pseudomonas atacamensis: JWU58_22120
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Entry
JWU58_22120 CDS
T07336
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00300
Lysine biosynthesis
pata01100
Metabolic pathways
pata01120
Microbial metabolism in diverse environments
pata01230
Biosynthesis of amino acids
Module
pata_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWU58_22120 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pata01002
]
JWU58_22120 (dapE)
Enzymes [BR:
pata01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
JWU58_22120 (dapE)
Peptidases and inhibitors [BR:
pata01002
]
Metallo peptidases
Family M20
JWU58_22120 (dapE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QSL86844
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Position
4832627..4833778
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AA seq
383 aa
AA seq
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MTAHADLSPTLQLAIDLIRRPSVTPIDADCQKQMMQRLGDAGFTLEPMRIEDVDNFWATH
GNNDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVADYPNHKGKVAFLITSDEEGPAHHGTKAVVERLVARNERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVKGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVSSSIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctatcgccgacccttcaactggccatcgacctgatccgccgt
ccttccgtgaccccaatcgatgccgactgccagaagcagatgatgcagcgcctgggcgat
gccggtttcaccctggagccgatgcgcatcgaagatgtggataacttctgggccactcac
ggcaacaacgacggcccggtgctgtgcttcgccggtcacaccgacgtggtgccgaccggt
ccggttaccgcatggcagatcgatccgttcaatgccgtgatcgacgaacatggcatgctc
tgcggccgtggcgcggcagacatgaaaggcagcctggcatcgatgaccgtcgccgctgaa
cgtttcgtcgccgactatccgaaccataaaggcaaggtcgctttcctgatcaccagcgac
gaagaaggcccggcgcatcacggcaccaaggctgtcgtcgaacgtctggtcgcgcgcaac
gagcgtctggactggtgcatcgttggcgaaccgtcgagcaccaccttggtcggcgatgtg
gtgaagaacggccgtcgcggctccctcggcgccaagctcacggtcaaaggcgtgcagggc
cacgtggcctacccgcatctggcgaagaacccgatccacctcgccgctccggcgctggca
gagctggccgccgagcactgggaccacggcaacgatttcttcccgccaaccagtttccag
atttccaacctcaattccggcaccggcgcgaccaacgtgatcccgggtgatctggtggcg
gtgttcaacttccgtttctccaccgaatcgaccgtcgaaggcctgcagaagcgtgtggcc
gacatcctcgacaagcatggtctggactggcacatcgactgggcgctgtccggcctgcca
ttcctcaccgaaccgggcgcgctgcttgatgcggtgtcgtcgagcatcaaggacatcacc
ggtcgcgagaccaaggcgtcgaccagcggcggcacctccgatggccgtttcatcgcgacc
atgggcacgcaagtggttgaactgggcccggtcaacgcgaccatccaccaggtcaacgag
cgcgtgctggcagccgatctcgacgtgctgaccgaaatctattaccagaccctgatcaag
ttgctcgcctga
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