Pseudomonas atacamensis: JWU58_22255
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Entry
JWU58_22255 CDS
T07336
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JWU58_22255 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pata01007
]
JWU58_22255 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pata03016
]
JWU58_22255 (lysS)
Enzymes [BR:
pata01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JWU58_22255 (lysS)
Amino acid related enzymes [BR:
pata01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JWU58_22255 (lysS)
Transfer RNA biogenesis [BR:
pata03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JWU58_22255 (lysS)
Prokaryotic type
Other AARSs
JWU58_22255 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QSL86869
LinkDB
All DBs
Position
complement(4861140..4862642)
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AA seq
500 aa
AA seq
DB search
MSDLQLDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRDNYCDALQKQYADKTKEE
LAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLSEDTLAAVKTWDMGDIIAAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFR
VRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAGAKVLGF
EGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIAN
AYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctacaactcgacccgcaagccctgcaacaggaagaaaactccctgatcgcc
ctgcgcaaggaaaagcttgctgccgagcgcgccaagggcaatgccttcccgaacgacttc
cgccgcgacaactactgcgatgccttgcagaaacagtacgcggacaagaccaaggaagag
ctggcagaggctgcaatcccggtcaaggttgccggtcgcatcatgctcaaccgtggctcg
ttcatggtgatccaggacatgaccggacgcattcaggtctacgtcaaccgcaagacgctg
tccgaagataccctggccgcggtaaaaacctgggacatgggcgacatcattgccgccgaa
ggcaccctggcgcgttccggcaaaggcgacctgtacgttgaaatgaccaacgtgcgcctg
ctgaccaagtcgctgcgtccgctgccggacaagcaccacggcctgaccgacaccgagcag
cgctaccgccagcgttacgtcgacctgatcgtcaacgaagacgtgcgccagaccttccgc
gtgcgttcgcaagtgatcgcgcacatccgcagcttcctgatgaagcgcgacttcctcgaa
gtcgaaacgccgatgctgcagaccattcccggcggcgccgcagccaagccgttcgaaact
caccacaacgcgctggacatggaaatgttcctgcgtatcgcaccagagctgtatctgaag
cgtctggtggttggcggttttgaaaaggtcttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgagttcaccatgttggagttctatcaggcgtacgcc
gattacgaagacaacatggacctgaccgaagaactgttccgcgagctggcgcagctggta
ctgggcagcaccgacgtgccgtacggcgacaaggtgttccacttcggcgagccgttcgtg
cgtctgtcagtgttcgactcgatcctcaagtacaaccctgagctgactgccgatgatctg
aacgacatcgacaaggctcgcgccatcgccaagaaggccggcgccaaggtgctgggcttc
gaggggctgggcaaattgcaggtgatgattttcgaagaactggtcgagcacaagctggag
cagccgcacttcatcactcagtacccgttcgaagtgtcgccgctggcccgtcgtaacgac
gagaacccgaacgtcaccgaccgcttcgagctgttcatcggtggtcgtgaaatcgccaat
gcctactccgagttgaacgacgccgaagatcaggccgagcgtttcatggcgcaggtggcc
gacaaggacgccggcgacgacgaagccatgcactacgacgccgacttcgtccgtgcgctg
gagtacggcatgccgccaaccgccggcgaaggtatcggcatcgatcgtctggtgatgttg
ctcaccaactcgccgtcgatccgcgatgtgatcctgttcccgcacatgcgaccgcaagcg
taa
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