Pseudomonas atacamensis: JWU58_22315
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Entry
JWU58_22315 CDS
T07336
Name
(GenBank) RHS domain-containing protein
Organism
pata
Pseudomonas atacamensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
DUF4595
DUF2963
TP_0579
OCRE
Motif
Other DBs
NCBI-ProteinID:
QSL86881
LinkDB
All DBs
Position
4876341..4881374
Genome browser
AA seq
1677 aa
AA seq
DB search
MNTPIGTLVLRVLDAKAPDVNLILKDFKNCLSDYKEWADGFWTGWALDVDQTFKVGNEVR
VTERKTKTGAVETYATCPLVGDFTLIHMFESARFVPIGNTPVKLEPVTKGTFYDDVTGPV
IETMIGPSGIKVIDGAKKGQTYRITFFPNVSQSDVKALYGSYQGVIGKLEGWLQSEWSSK
FQPQWASYSAADRAGRSVILLKRALDGFEQALLRLWDDIKSLFDLLAHPQKNYAKLKEYL
SDVEIDKLYAASKESIASGLLILSDEPLMFIYVSAIVAWVGMLPPQVIVDVMTAIASEFL
INVLLGICLTGGAGLAVRAGTKVITTVKSGEAIKYLDDLASTLMTLSSKHALPAHAQASK
PIIASAKNVPMKPAKTAVLKIDEATTEAPKAGSRNAEPKSHVAGLPPKSQLPKTTDTPKQ
EVKDASSFPRDKKQNQTSLQPKEKVDDAPDQSKTPDDKSATCAKKTCTNGCPVSMVTGEE
LLTITDGELGGLLPFTWTRLYRTSAAEIDCGLGYGWSHALAQRVDINGDEVVWTDHENRV
TTFPMPSEQRPAITNSLSEAAIFIGGDASELVLTQAGERKQFYHFRFNSKGATLIAISDN
YDNRVHITRDIHGRIKRVDNGAGRALLVRYDRKHIIAIDYQQFVPADTLEDAWSTVQTLV
TYTYDAQQRLTNATNAAGESERYTYNEQNVILERQLAGGASFYWEWEKEGKSARCIHHWA
SFSQMDAHYAWDDKGSVTVTNADGSEEVYTHDDKARLVAKVDPDGAEHLKAYDDKGRLIA
EKDPMGAVTDYQYNEAGRLIAVIPPEDAPTTYEYYKGFVRVVNRGTAKWVYWRNDQGDIT
EQVDPDGNSTHYTYDRQGRLLEIRHPDGSRHQLGWNNLGQLLEERLPDGGQRKYRYDALG
RQITRQAETGAITHYEWDAANRLAQITLPGGATRAFSYNPYGRVTAERDELGRITRYEYA
DNLHLVSRRINPDGSQLHYRYDNARLLLTEIENERGEHYRLDYYSNGLIQQETGFDGRRT
AYEYDLNGKLLKKTEYGDDGSELVTEYQRDASGRLLVKTLADGEEIHYSYDALGRLVNVD
DGHWPLAYEYDVQDRLITEHQGWGTTRYEYDSVGQLSHCRLPDGSTLDYRHLSGGRLSSI
DLNGSRLTTHQFDAGRERQRQQGVLLSQYQYDEQGRLQAHTVGQQDRNLFQRRYAYDENG
NLAGIDDSRKGNRSYHYDPLDRLVSVRGAIPETFAHDPAGNLLGQNDLPTANLADVKGNR
LLMQGDRHYDYDAYGNLTRERRGTGQRLVTEYHYDCQHRLIGVSLPGGSTATYKYDAFGR
RIEKTVDGQTTEFLWQGERLIAESAESRYRTYIYEPGSFRPLAMLDGEGPLKATPFYYQL
DHLGTPQELTDFSGEIMWSAKYRAYGNLAALDVAEIDNPLRFQGQYFDAETGLHYNRHRY
YNPGTGRFLTPDPIKLAGGLNNYQYVPNPTGWVDPLGLNSTCPEPDCKLPTNSANATKPD
HLPMSQEKFDEIIDMNKADRPPSPNEYLPDSYVSAHRELFAKEGGSFVVIESWITDSRYP
SFPQRKFVGLTSEMDEVVKKYRAAGNDWNVLNKELNLGAKTLEGESIYIVKIKPDDPRFS
YEMPNGRENGAYPNQWVPGGATKSGTKEAALIGSENVTHNSDIGTLLKNFEDWEKLQ
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgaataccccgattggtaccctggtcctgcgtgtgctggacgccaaagcgcctgacgtg
aatctgatactcaaagacttcaaaaactgcctgagtgattacaaggaatgggcagacggt
ttctggactggttgggcgctggacgtcgaccagaccttcaaggtcggcaatgaagtccga
gtgactgaacgaaagaccaaaacgggtgccgtggaaacatacgcaacctgcccactggtg
ggtgatttcacgctgatccacatgtttgagtcagcgcgatttgtacctatcggaaatact
ccagtgaaactggagccagtcaccaaaggcaccttttacgacgacgttaccggtccggtc
atcgaaaccatgatcggcccaagcggcatcaaagtgatagatggggccaaaaagggccag
acctatcgcatcacgttcttccccaacgtatcccagagtgacgtcaaagccctctatggc
tcctatcaaggcgttatcggcaagcttgaaggctggctgcaaagcgaatggtcgagcaag
tttcagccgcagtgggcgagctactcggcggcagatcgtgcggggcgctcggtcattttg
ctcaaacgagcgctggacggttttgagcaagctctcctccgtctgtgggatgacatcaaa
agcctgttcgacctgctcgctcatcctcaaaaaaactacgcaaaactcaaagaatatttg
tcggacgtcgaaatcgacaagctatacgctgcttcgaaagagtccattgcttcagggttg
ctgatcctcagcgacgaaccgctgatgttcatctatgtctcggcgatcgtggcttgggtc
ggcatgctcccgccgcaggtaatcgtcgacgttatgacggcgatcgcttcggagtttctg
atcaacgtactactgggtatctgcctgacaggtggcgctggacttgctgtaagagccggg
acaaaagtcattaccacggtcaaatcgggcgaagcgattaagtatctggacgatcttgca
tctaccctgatgacactcagtagcaaacacgccttgcccgcccatgcgcaagcgtcgaaa
ccaatcatcgccagcgccaagaatgtgccgatgaagcctgccaaaaccgcagtgctgaaa
atcgatgaagctaccaccgaggcgccaaaggctggctcgcgtaacgctgaacccaaaagt
catgtagcggggctgccgcccaaaagccagctgccgaaaactacagatactccaaaacag
gaagtcaaagacgcttcttcgtttccacgagacaaaaaacagaatcaaacctcgctccag
ccaaaggaaaaggtcgacgacgctcccgatcaatccaagacgcccgacgacaaaagcgcc
acctgcgccaagaaaacctgcaccaatggctgcccggtttcgatggtgacgggtgaagag
ctgttgacgattaccgacggtgaactcggcggtttgttgccctttacatggacacgcctc
tatcgcaccagtgcggcggaaatcgactgcggcctcggttatggttggagtcacgccctc
gcccagcgagtggacatcaatggcgatgaagtcgtttggactgaccacgaaaaccgtgtc
acgacgtttccgatgccgagcgaacagcgtccggcaatcaccaatagcctttcggaagcg
gccatcttcattggcggtgatgcttccgagcttgtactcacacaggcaggtgaacgtaag
cagttctatcacttccgcttcaacagcaaaggcgcgacgctgattgccatcagcgataat
tacgacaaccgtgtacatatcacccgagatatccatggtcgcatcaagcgtgtggacaac
ggggccggtcgagcacttctggttcggtatgaccgcaaacacatcatcgctatcgactat
cagcaatttgtcccggcagacacactggaagatgcgtggagcaccgtgcagaccctggtc
acttacacgtacgatgctcagcagcgcctgaccaacgcgacgaacgctgccggtgagtct
gagcgttacacctacaacgaacagaacgtcattctcgagcggcaacttgcaggtggcgcg
agcttctactgggagtgggaaaaggaaggcaagtccgcacgctgcatccatcactgggcc
agtttctctcagatggatgcgcactatgcgtgggatgacaaaggcagcgtcaccgttacc
aacgccgatggcagtgaagaagtctatacccacgatgacaaggcgcgacttgtcgccaag
gttgatccggatggtgccgagcacttaaaagcctatgacgataaaggccgactgatcgcc
gaaaaagacccaatgggtgcggtcacggattatcagtacaacgaggccggccgtttgatc
gcggtgataccgccagaagacgcgccgaccacctacgagtactacaagggctttgtccgt
gtggtgaatcgcggtaccgccaaatgggtctactggcgtaacgaccagggggacatcact
gaacaagtcgatccggacggcaactcgacgcattacacctatgatcgccaaggacggctg
ctggagatccgccatcctgacggtagccgtcaccaactggggtggaacaatctcggccaa
ttgctggaggagcgcctgccggacggaggccagcgcaaataccgctacgacgcactcggt
cggcagatcacacgtcaggctgaaaccggagcgattactcactatgaatgggacgctgcg
aatcggctggcacaaattaccctgcccggcggcgctactcgggcgttcagttacaaccca
tacggtcgcgtcaccgcagagcgcgacgaactgggtcggatcacgcgctatgaatacgcc
gacaatctccatctggtcagccgtcgaatcaatccggacggcagccaactgcactatcgc
tacgataatgcgcgtcttttgctcactgaaatcgaaaacgaacgcggtgagcattaccga
ctcgattactacagcaacggcctgatccagcaggaaaccggcttcgacgggcgtcgcact
gcgtatgagtacgacctcaacggcaaactgctgaagaaaaccgaatacggcgacgacggc
agtgaactagtgaccgagtaccagcgcgacgcctctggccgcttgctggtcaaaaccctc
gcagatggcgaggaaatccattacagctacgatgccttgggtcgcttggtaaacgttgac
gacggccactggcccctcgcctatgagtacgacgtacaagatcgtctcattactgagcac
caaggctggggcaccacgcgttacgagtacgacagcgtcggccaattgagtcactgccga
ctccctgatggcagcacgcttgattatcgtcacctgtccggcggccgactgagcagtatc
gacctcaatggctcgcgcctgactacgcaccaattcgacgctggccgcgaacggcagcgc
caacaaggcgtactgctgagccaataccaatacgacgaacagggcaggcttcaagcgcac
accgtgggtcagcaagaccgcaacctgttccagcgccgctacgcctacgatgaaaatggc
aatttggccggcatcgatgacagccgcaagggaaaccgcagctaccactacgacccactg
gatcgtctggtcagtgttcgcggtgccatacccgaaaccttcgctcacgacccagccggc
aacttgctcggtcaaaacgatctgccaacggcaaaccttgccgacgtcaaaggtaatcgc
ctgcttatgcaaggtgaccgccactacgactacgatgcctatggcaacctgacccgcgaa
cggcgtggaaccggccagcgtctggtcaccgaataccactatgactgccagcaccgtttg
atcggcgttagcctacccggaggcagtaccgcaacctataaatacgacgcttttggccgt
cgcattgaaaaaaccgttgacggacaaacgactgaattcctctggcaaggcgagcgcctg
atcgccgaaagtgctgagagtcgctaccgcacctacatctacgagcctggtagcttccgc
ccgctggcaatgctcgatggcgaaggcccactgaaggccacgccgttctattaccaactc
gaccatctcggcacgccgcaagaactcaccgacttcagtggcgagatcatgtggtctgcg
aaataccgtgcctacggcaacctggcagcgttggacgtcgccgaaatcgacaaccctttg
cgtttccagggtcagtatttcgatgccgagacggggttacattacaaccggcaccgctac
tacaatcctgggactggacggtttttgacaccggatccgatcaaacttgcgggtgggttg
aacaactaccagtatgtgcccaaccctacggggtgggttgatccgttgggcttaaattca
acgtgccctgaacccgattgcaaattaccaacaaattctgcgaatgctacaaaacctgac
caccttcctatgagtcaggaaaaattcgatgaaattatcgatatgaacaaggcggatagg
ccgccaagccccaatgagtatctgccggatagttacgttagtgcgcaccgcgagcttttt
gcaaaagaagggggatctttcgtagtgatcgagagctggatcaccgactcaagatatcca
agttttccacaaagaaaatttgtcggacttacctctgaaatggacgaagttgtcaagaaa
tatagagcagcgggaaatgactggaatgttctcaacaaggaactaaatctcggtgcaaaa
accctagaaggtgagagcatatacatcgtcaaaataaaaccggatgatccgagattcagc
tacgaaatgccaaacgggcgtgaaaacggcgcttatcctaaccaatgggtcccaggcgga
gctaccaaaagcggaacaaaagaggcagcattgatcggctcagaaaatgttactcacaac
agtgacattggaacgttgttgaaaaattttgaagactgggaaaagcttcaatga
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integrated database retrieval system
