Pseudomonas atacamensis: JWU58_22375
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Entry
JWU58_22375 CDS
T07336
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pata
Pseudomonas atacamensis
Pathway
pata03410
Base excision repair
pata03430
Mismatch repair
pata03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWU58_22375 (recJ)
03430 Mismatch repair
JWU58_22375 (recJ)
03440 Homologous recombination
JWU58_22375 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pata03400
]
JWU58_22375 (recJ)
DNA repair and recombination proteins [BR:
pata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JWU58_22375 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JWU58_22375 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JWU58_22375 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QSL86891
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All DBs
Position
complement(4893414..4895123)
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AA seq
569 aa
AA seq
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MRIEPRQLPATLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALTREPQLLITVDNGISSVEGVAAAKRAGLKVLITDHHLPGDELPKADALVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYESKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKREAARITSTDLGFIVGPRLNAAGRLDDMSLGIEC
LLTADANLAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALSVVAAQHPNLIAKYGG
HAMAAGLTLPQENFPLFAEAFDAEVRRQLREEDLTGRMLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGIDRDVWPNPTIQ
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgtcaactgcctgccacgctgcctttccttggtgatctgccgcca
ctgctgacccgcctgtacgcggcgcggggcgtgcaatcggaagcggagctggacaaaagt
ctggcgcgcttgatcccgttccagcagctcaaaggcattgatgcggcggtcgacctgctg
gtgacggcattggagcaacgccagcgcattttgatcgtcggcgacttcgatgcggacggc
gccaccgccagcaccgtcggtgtcctcggcctgcgcctgctgggcgcggcgcatgtcgat
tatctggtgccgaaccgttttgaatacggctatggcctgacaccggaaatcgtcgaagtc
gcgctgacccgtgaaccgcaactattgatcaccgtcgataacggcatctccagtgtcgaa
ggcgtcgcggcggccaagcgcgccggactgaaggtattgatcaccgaccaccacttgccc
ggcgatgaactgccgaaggccgatgcgctggtcaatccgaaccagccgggctgcgagttt
ccgagcaaagcgctggccggcgtcggggtgattttttatgtgttgatggccttgcgcgca
cgcctgcgcagccttggctggtacgagagcaaaccgcaaccgaacatcggcgaactgctc
gatctcgtggcgctgggcagcgtcgccgacgtggtgccgctggatgccaacaaccgcatt
cttgtgcatcaagggctggagcggattcgtgccggccgggcgcggccggggatcaaggcg
atcctcgaagtcgccaagcgagaggctgcgcggatcacttccaccgacctgggttttatt
gtcggccctcgcctgaacgccgccgggcgtctggacgacatgagcctgggcatcgaatgc
ctgctcaccgccgacgccaatctggcgcgggaaatggctgcgcaactggacggcatgaac
caggatcgcaaatccatcgagcagggcatgcagcgagaagcgctggcgcagctcaaggat
ctgccggtcgagtcgatgccgttcggtctgtgcctgttcgatccggagtggcaccagggt
gtgatcggcattctcgcttcgcggatgaaagagcgctatttccgcccgaccattgctttt
gccgatgccggtgatggtctgctcaagggctccggtcgctcggtgcagggcttccatatt
cgcgatgcgctgagcgtggtcgcggcgcagcatccgaacctgatcgccaagtacggtggc
cacgcgatggccgctggtctgaccttgccgcaggagaattttccgctgttcgccgaggca
ttcgacgctgaagtacgtaggcaacttcgtgaagaagacctcactgggcgcatgttgtcg
gacggcacgctggccgtcgaagagttccacctcgaactggcgcgcgccttgcgccacgcc
gggccatggggtcagcactttccggagccgctgtttcatggcgtgttccagttggtcgag
cagcgcgtggttggcgaacggcatttgaaagtagtgctgaaaagcgaatgcggttcggtg
aagctcgatggcatcgcgtttggcattgatcgcgatgtgtggccgaacccgacgattcaa
tgggttgaactggcttacaaactcgacgtcaacgagtttcgtggcaacgagactgtgcag
ttgatgatcgcccacatcgaaccgcgctga
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