Pseudomonas atacamensis: JWU58_22450
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Entry
JWU58_22450 CDS
T07336
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata02024
Quorum sensing
pata03060
Protein export
pata03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JWU58_22450 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JWU58_22450 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWU58_22450 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pata02044
]
JWU58_22450 (ffh)
Enzymes [BR:
pata01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JWU58_22450 (ffh)
Secretion system [BR:
pata02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JWU58_22450 (ffh)
Eukaryotic Sec-SRP protein
JWU58_22450 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
APS_kinase
AAA_33
YqeC
AAA_24
ParA
KTI12
AAA_31
cobW
nSTAND3
Thymidylate_kin
6PF2K
AAA_18
AAA_30
Helicase_RecD
ABC_tran
AAA_16
AAA_17
PaREP1
AAA_5
SLFN-g3_helicase
ATP_bind_1
NACHT
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QSL86906
LinkDB
All DBs
Position
complement(4908974..4910350)
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVILMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADIYRPAAIKQLETLANDIGVTFFPSDLSQKPVDIANAAIKEAK
LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALDPFHPERIASRILGMGDV
LSLIEQAEATLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQNAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFTAKGGMAKMMRGMGGMLPGGGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacttaaccgaccgtctctcgcagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaggacaatatcaaagacaccctgcgtgaagtgcgcatggcgttgctcgaa
gctgacgtcgcattgccggtggtcaaggacttcgtcaattcggtcaaggagcgcgctgtc
ggcaccgaggtgtcgcgcagcctgacgccgggccaggcattcgtgaagatcgtccaggcc
gaactcgaaagcctgatgggcgcggcaaacgaagacctcaacctgagtgccgttccgcca
gccgtgattctgatggccggtctgcagggcgcgggtaaaaccaccactgccggcaagctg
gcgcgctttcttaaagagcgcaagaagaagtcggtcatggttgtttcggcggacatctat
cgtccggcggcgatcaagcagctggaaaccctggccaacgacatcggcgtgacgttcttc
ccgtccgacctgagccagaagccggtcgacatcgccaatgcggctattaaagaagcaaaa
ctgaaattcatcgacgtggtcatcgtcgatactgccggtcgtctgcacatcgacgaagag
atgatgggcgagatcaaggcgctgcacgccgcgatcaacccggtcgaaaccctgttcgtg
gtcgacgccatgaccggtcaggacgccgccaacacggccaaggcgttcggcgatgcgctg
ccgctgaccggtgtgatcctgaccaaggtcgacggcgacgcccgtggcggtgccgcgctg
tcggtgcgcgccatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgaa
gcgctcgatccgttccaccctgagcgtatcgcctcgcggatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgaagcgacgctggacaaggacaaggccgacaaactggcc
aagaagctgaagaagggcaagggcttcgacctcgaagacttccgcgatcagctgcaacag
atgaagaacatgggcggcctcggcgggctcatggacaaactgccgagcatcggcggcgtc
aacctgtcgcagatgggcaatgcccagaacgccgcagagaagcagttcaagcagatggaa
gccatcatcaattccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaagcgccggatcgccatgggttccggcacgcaggtgcaggacatcggccgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaaattcaccgccaagggcggtatggca
aaaatgatgcgcggcatgggcggtatgttgcccggcggcggtatgccgaaaatgtaa
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