Pseudomonas atacamensis: JWU58_22570
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Entry
JWU58_22570 CDS
T07336
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pata03019
]
JWU58_22570 (rnc)
03009 Ribosome biogenesis [BR:
pata03009
]
JWU58_22570 (rnc)
03036 Chromosome and associated proteins [BR:
pata03036
]
JWU58_22570 (rnc)
Enzymes [BR:
pata01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JWU58_22570 (rnc)
Messenger RNA biogenesis [BR:
pata03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JWU58_22570 (rnc)
Ribosome biogenesis [BR:
pata03009
]
Eukaryotic type
90S particles
RNase
JWU58_22570 (rnc)
Prokaryotic type
rRNA processing factors
JWU58_22570 (rnc)
Chromosome and associated proteins [BR:
pata03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JWU58_22570 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
QSL86930
LinkDB
All DBs
Position
complement(4942307..4942996)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEHLQSRGCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctctaagccgtctcgagcgccagctcggttacaccttcaaggatcaggag
ctgatgctgctggccctcacgcaccgcagttttgccgggcgcaacaacgagcgtctggag
ttcctcggtgatgccatcctcaacttcgtcgctggcgaggcgctgttcgatcgcttcccg
ctggcccgcgaaggccagttgtcgcgtttgcgcgcacggctggtaaaaggtgagaccctg
gccgtactcgctcgcggtttcgacctcggtgattatttgcgtctgggttcgggtgaactg
aagagcggtggtttccgccgtgaatccattctggccgatgccctcgaagctctgatcggt
gcgatctacctcgatgccggcatggacgtcgcccgcgagcgcgtgctggcctggctggcc
ggcgaattcgaagggctgacgctggtcgacaccaacaaggatccgaaaacccgcttgcag
gaacacctgcaatcgcgcggttgcgaactgccacgctacgaagtggtggatatccagggc
gaaccgcactgccgaaccttcttcgtcgaatgcgaagtggtcttactgaatgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga
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