Pseudomonas atacamensis: JWU58_23240
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Entry
JWU58_23240 CDS
T07336
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pata03019
]
JWU58_23240 (rapZ)
Messenger RNA biogenesis [BR:
pata03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JWU58_23240 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_28
AAA_22
CoaE
AAA_16
AAA_29
FtsK_SpoIIIE
RsgA_GTPase
T2SSE
ABC_tran
SKI
Motif
Other DBs
NCBI-ProteinID:
QSL87062
LinkDB
All DBs
Position
5083004..5083861
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AA seq
285 aa
AA seq
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MRLIIVSGRSGSGKSTALNVLEDNGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLEDVRAKHIKCDVLYLDADEETLLKRFSETRRRHPLSNANRSLAEA
IHDETALLGPIADLADLKINTTNLNLYQLRDTLKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRAQSGLDAPVAEYLAQQPDVEEMYQDIYAYLNKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQALQKTLKNVQVRHRDLT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgatcattgtcagtggccgttcgggctcgggtaaaagtaccgccctgaatgtc
cttgaggacaacggctactactgcatcgacaatctgccggccggtttgctgccggaactg
gccgagcgtgcgctgattcacacggaactggcgcagccgctggtcgccgtgtcgatcgat
gcgcgcaacctgcccagccatctgtcacgtttccccgaattgctcgaagacgtccgtgcc
aaacacatcaagtgcgatgtgctgtacctggacgccgacgaagaaaccctgctcaagcgt
ttttccgagacccgtcgtcgtcacccgctgagcaacgccaatcgctcactggccgaggcg
attcacgatgaaaccgccctgctcggcccgatcgccgatctggctgacctgaaaatcaac
accaccaacctcaatctgtatcaactgcgcgataccctgaagttgcgcctgttgaatcag
cctgagcccggcacggcgtttctggttgaatcatttggcttcaagcgcggcatgccggtc
gacgccgacctcgtgttcgatgtgcgctgcctgcccaatccgtactggaaacccgagctg
cgcgctcagtccggcctcgatgcccctgtggccgagtatctggcgcagcagccggatgtc
gaagaaatgtatcaggacatctacgcctacctgaacaagtggctaccacgcttcgccgcc
agcaaccgcgcctacgtgaccattgccattggctgcaccggcgggcaccaccgctccgtc
tacctgaccgaacgtctgggtcaggccctgcagaaaaccctgaagaacgtccaggttcgc
caccgcgacctcacctaa
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