Pseudomonas atacamensis: JWU58_23845
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Entry
JWU58_23845 CDS
T07336
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_23845
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
Other families
JWU58_23845
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Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
LacI
Motif
Other DBs
NCBI-ProteinID:
QSL87174
LinkDB
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Position
complement(5223057..5223917)
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AA seq
286 aa
AA seq
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MDILYQIRARQDSFSAGEGRIARLMLDDVGFAASASLEDLAQRAEVSTATLSRFARTVGC
RDLRDLRLQLAQASGVGSRFLDPAGTPEQSAFYGQIVGDIETTLRQHLAGFDESRFADAV
KLLGQARMIHAFGMGGCSTLCSDELQVRLVRLGYPIAVCHDAVMMRVTAASLNAEQVLIA
CSLTGITPELLETVELARNYGARILAITRGDSPLAELADVVLPLQGAETSFIYKPTAARY
GMLLAIDVLATELALASPEDNQERLRRIKLALDEYRGGDDHLPLGD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctctaccagatccgcgcccgccaggattccttcagtgccggcgaggggcgc
attgcgcggttgatgctcgacgatgtcgggtttgccgccagcgccagcctcgaagacctc
gcacaacgcgccgaggtcagcaccgccacgctgtcgcgctttgcccgcacggtcggctgc
cgcgacctgcgtgatctacgtctgcaactggcccaggccagcggcgttggcagccggttt
ctcgacccggcgggcacgcctgagcagtcggcgttctacgggcagatcgtcggcgacatc
gaaaccaccctgcgccagcatctggccggtttcgacgaatcgcgcttcgccgacgcagtg
aaattactcggtcaggcgcggatgattcacgcgttcggcatgggcggttgctcaaccctg
tgcagcgatgaattgcaggtgcgcctagtgcgcctcggttacccgattgcggtgtgccac
gacgcggtgatgatgcgcgtcaccgccgccagtttgaacgccgagcaagtgctgatcgcc
tgctcgctgaccggcatcaccccggagcttttggaaaccgtggagctggcgcgcaactac
ggcgcgcgcattctcgccatcactcgcggcgattcaccactggccgaactggccgacgtc
gtgctgccgctgcaaggcgcagaaacctcgttcatctacaaaccgacggcggcgcgctac
ggcatgctgttggccatcgacgtgctcgccaccgaactggcgctggccagccctgaagac
aatcaagaacgtctgcggcgaatcaaactcgccctcgacgaataccgtggcggcgacgac
cacctgccgctgggagactga
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