Pseudomonas atacamensis: JWU58_23980
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Entry
JWU58_23980 CDS
T07336
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_23980
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JWU58_23980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_34
DUF6166
Motif
Other DBs
NCBI-ProteinID:
QSL87194
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Position
5256481..5257401
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AA seq
306 aa
AA seq
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MSSRRADPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLR
LCQRGRAGFSLTEEGREVYQSALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPH
MRITHALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHVGVVPQASALSGLEYQPLYSE
RSLLYCAVGHPLFYVDDKQLDDQRLDSQDAIAPTFRLPAEIQAHYQALNCTASASDREGM
AFLILTGRYIGYLPDHYANLWVQQGRLRALKAGTRFYDLSLASVTRKGRRPNLVLESFLE
SLAATR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgccgcgccgatccgctggcccaggtcagtgattttgatattcgcctgctg
cggatttttcgcagtgtcgtggagtgtggcggcttctccgcagcggaaaccgtgctcggc
atcgggcgctcggcgatcagccagcagatgagcgatctggagcagcgcctcggcttgcgc
ttgtgtcagcgtggccgggccggattttccctgaccgaggaaggtcgtgaggtgtatcag
tcggcactacagctgttaagtgcactggagagtttccgcactgaggtcaacggcctgcac
caacacctgcgcggcgagctgatcatcggcctcaccgacaacctcgtcaccctgccgcac
atgcgcatcacccacgccctcgcgcagttaaaagaacgcgggccggatgtgcagatccag
atccgcatgattgcgccgaatgaagtcgagcaaggcgtgctcgacgggcgtctgcacgtt
ggcgtggtgccgcaggcaagcgcattgtcgggactggaatatcagccgttgtacagcgag
cgttcgctgctgtattgcgcggtgggtcatccgctgttttatgtcgacgacaagcaactc
gatgatcaacgcctcgacagtcaggacgcgattgcgccgacctttcgtttgccggcggag
attcaggcgcattatcaggcgctcaactgcaccgccagtgcctctgaccgtgagggcatg
gcgtttctgattctgaccgggcgctacatcggttacctgccggatcactacgccaatctt
tgggtacagcaggggcgcttgcgtgcgctcaaggccggcacgcgtttttacgatttgagt
ctggcatcggtcacgcgcaaggggcggcgccctaatttggtgctggaaagtttcctcgag
agtctggccgcgacgcgatag
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