Pseudomonas atacamensis: JWU58_24125
Help
Entry
JWU58_24125 CDS
T07336
Name
(GenBank) collagen-like triple helix repeat-containing protein
Organism
pata
Pseudomonas atacamensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_mid
Baculo_PEP_C
PhiKZ_gp35
Motif
Other DBs
NCBI-ProteinID:
QSL87223
LinkDB
All DBs
Position
5288717..5290318
Genome browser
AA seq
533 aa
AA seq
DB search
MKTQVMWSKSAIALALILSVGLVGCSSGGGGHRSSSGSSTADGTAGTDGSGGAGGGTGGD
TAGTGGTGGTGGDTAGTGGTGGTGGTGGTGGGTDPTNPTNPTDPTDPTNPTNPAAPSLVT
TTLVQDVGKTVSGVGDGIGQIGDSLSTVPVAGGIVQSVANTTGNVVSTLGDGVTDGIGKL
ATDPNGLTTTVASVGGVVSDVGDGVSDLSVKLNTATRSVPVVGGVVTRVAPLVDGIGEKV
TMLGDTLNTSLTSGPTSQLTNKVGSGLVPVIAMVESTTDKLGVTTGLGDPLKGVISKVGG
TVNSLGGKVTNAGSGNALTNTLGGALSNTGTAVGKAGGLVSNGTGSGTGGIGGIGGGLGG
TGLLQTVGGAVVNVGSGLNAGSTSGVVSAGGVTAGGLGNTIASINTVLGGSGTPITATTS
PLASVGAAVGAGLNPVTSAVTTVTQQVGAATGLGTPVAGLTNQVGAAVGNLGGAIAATNN
PVTTAVGGLVTNVGGTVAAVGGLVNSGTATGGTTGGLGGVLGGLTGALGGNKR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcaagtgatgtggtccaaatcggcaatcgcgttggcactgattctttcggtc
ggcctcgtcggctgcagcagcggcggtggcggtcatcgcagcagttcgggcagctcgacg
gcggacggcacggcgggcaccgatggcagcggtggcgcgggcggcggaaccggcggcgat
actgccggcaccggcggtacaggtggcaccggcggcgataccgcaggcactggtggaacc
ggtggcactggcggcactggcggtaccggcggtggcaccgatccgaccaacccaaccaat
ccgacagacccgaccgatcccaccaacccgaccaatcccgctgcaccttcgctggtgacc
acaacacttgttcaggatgtcggcaaaaccgtcagcggtgtcggcgatggcatcggccag
atcggcgattcactgagtactgttccggtcgctggcggcatcgtccaaagcgtggccaac
accaccggcaacgtggtcagcaccttgggcgatggcgttactgatggcatcggcaaactg
gccactgaccccaatggcctgaccaccaccgtggcctcggttggcggcgtggtttccgat
gttggcgacggtgtgtcggacctcagcgtcaaactcaacaccgcgacccgtagcgttccc
gtcgttggcggtgtagtcacccgggtggcgccgctggtcgatggcatcggtgaaaaagtc
accatgcttggcgacaccctcaacacctcactgaccagcggcccgaccagccagttgacc
aacaaggtcggcagcggcctggtgccggtgatcgccatggtcgaaagcaccaccgacaaa
ctgggcgttaccaccggcctgggtgatccgctcaaaggggtgatctcgaaagtgggcggc
acggtgaacagcctcggcggcaaagttaccaacgcaggcagcggcaatgccctgaccaac
accctcgggggcgccctgagcaacaccggcacggcggtcggcaaagcgggcggcctggtg
tccaatggcactggctcgggtactggcggcatcggtggcatcggtggcgggctgggcggc
accggtctgctgcaaaccgtgggtggcgcggtggtcaacgtcggcagcggtctgaatgcc
ggcagcaccagcggcgtggtcagtgccggcggcgtcaccgctggcgggctgggcaacacg
attgcgtcgatcaacaccgtactcggcggctcgggcacaccgatcactgcaaccacttcg
ccgctggccagtgtcggcgccgcagtcggtgcgggcctcaatccggtcaccagcgcggtc
accactgtcactcaacaggtcggcgccgctaccggtctcggcactccggtcgctggtctt
acaaatcaggtgggcgccgcagtcggcaatctcggcggagcgattgccgccaccaacaac
ccggtcaccactgctgtcggcggtctggttaccaacgtcggcggcaccgtggcagcggtc
ggtggcctggtcaacagcggcactgccactggcggcacaactggcggtctgggcggggta
ctcggcggcctgaccggcgcgctgggcggcaacaaacgctaa
DBGET
integrated database retrieval system
