Pseudomonas atacamensis: JWU58_24265
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Entry
JWU58_24265 CDS
T07336
Symbol
speA
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00330
Arginine and proline metabolism
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JWU58_24265 (speA)
Enzymes [BR:
pata01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
JWU58_24265 (speA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
QSL87251
LinkDB
All DBs
Position
complement(5317782..5319695)
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AA seq
637 aa
AA seq
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MSVRRTRKDDGSQWTVADSRSVYGIRHWGAGYFAINEAGRVEVRPNGPSSSPIDLFEQVD
QLRKSGLSLPLLVRFPDILQDRVRQLTGAFDSNIERLEYQSKYTALYPIKVNQQEAVIEN
IIATQNVSIGLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVI
EKESEVGLVIEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERF
RGAGLDQGIRLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDY
DGTHSRNASSINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVT
DVEKHNDEIPLIENKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVAAQYADGKL
TLAEKALAEQCYFAVCRRLHNSLKARQRSHRQVLDELNDKLADKYICNFSVFQSLPDTWA
IDQVLPIIPLHRLDEEPLRRAVLQDLTCDSDGKINQYVDEQSIETSLPVHALNEGEDYLL
GVFLVGAYQEILGDMHNLFGDTDSVNIYQNADGSVYHAGIETHDTIEDMLRYVHLSPEEL
MTHYRDKCASARISASERTQFLDALRLGLTRSSYLSS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgacgcacacgtaaagacgatggcagccaatggacagttgcggacagccgc
agcgtttacgggattcgccattggggggccgggtatttcgcgatcaatgaagccggtcgc
gtcgaagtacgtccgaacggcccgagcagctcgcctatcgatctgttcgaacaagtcgac
caactgcgcaagagcggtttgtccttgccgctgctggtgcggttccccgacatcctgcaa
gaccgtgtccgtcagttgaccggcgctttcgattcgaacatcgagcgcctggaataccag
agcaaatacaccgcgctgtacccgatcaaggtcaaccagcaggaagcggtgatcgagaac
atcatcgccacccagaacgtttccatcggtctggaagccggctccaagcctgagctgctg
gccgtgctggcgctggcgccgaagggcggcaccatcgtctgcaacggttacaaggaccgc
gagttcatccggctggcgctgatgggccagaagctcggccataacgtgttcatcgtcatc
gagaaagaatccgaagtcggcctggtgatcgaagaagccgcctcgctgaaggtcaagccg
caggtgggcctgcgcgtgcgcctgtcgtcgctggcctcgtcgaaatgggcggacaccggt
ggcgagaaatccaaattcggtctgtcggcggcacaactgctgtcggtggtcgagcgcttt
cgtggcgccggcctggatcagggcatccgcctgctgcacttccacatgggttcgcagatc
gccaacctcgctgactaccagcacggtttcaaggaagcgatccgttactacggcgaattg
cgcaacctcggtctgccggtcgatcacatcgacgtcggcggcggcctcggtgtcgactac
gacggcacccactcgcgcaacgccagttcgatcaactacgacatggacgattacgccggt
gtcgtggtcggcatgctcaaggaattctgcgacgcgcagagcctgccgcatccgcacatc
ttctccgagagtggccgttcgctgaccgcgcaccacgcaatgttggtggtgcaggtcacc
gacgtcgagaaacacaacgacgaaatcccgctgatcgagaacaaagagagcctgccggaa
accgtgcagtggctggtcgatctgctcggcccgaccgacatcgaaatggtcaccgaaacc
tactggcgcgccacccactacatgagcgacgtggccgcgcagtatgccgatggcaagctg
accctggcggaaaaagccctcgccgagcagtgctacttcgccgtgtgccgtcgcctgcac
aactcgctgaaggcgcgtcagcgttcgcaccgccaggtgctcgacgaactcaacgacaag
ctggccgacaagtacatctgcaacttctcggtgttccagagcctgccggacacctgggcg
atcgatcaggtgttgccgatcatcccgctgcatcgcctcgacgaagagccgctgcgccgc
gcggtgctgcaggatctgacctgcgactccgacggcaagatcaaccagtacgtcgacgag
cagagcatcgaaaccagcctgccggtgcacgcgttgaatgaaggcgaagattacctgctg
ggcgtgttcctggtcggcgcctatcaggaaatcctcggtgacatgcacaacctgttcggt
gacaccgactcggtgaacatctaccagaacgccgatggcagcgtgtaccacgccggtatc
gagacccacgacaccatcgaagacatgctgcgttatgtgcacttgtcgccggaagaactg
atgactcactaccgcgacaagtgcgccagtgcccgcatcagtgccagcgagcgcacgcag
ttcctcgatgccttgcgtctgggcctgacccgctcttcctatctgtcttcctga
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