Pseudomonas atacamensis: JWU58_24835
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Entry
JWU58_24835 CDS
T07336
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pata
Pseudomonas atacamensis
Pathway
pata03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JWU58_24835 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pata03019
]
JWU58_24835 (orn)
03009 Ribosome biogenesis [BR:
pata03009
]
JWU58_24835 (orn)
Messenger RNA biogenesis [BR:
pata03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JWU58_24835 (orn)
Ribosome biogenesis [BR:
pata03009
]
Eukaryotic type
Pre-60S particles
RNases
JWU58_24835 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QSL87357
LinkDB
All DBs
Position
complement(5470756..5471298)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDNDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccgcagaacctgatctggatcgacctggaaatgaccggtctggacccggac
aacgatgtcatcatcgaaatggccaccatcgtcaccgacagtgagctgaatacattggcc
gaaggcccggtgatcgccatccatcacagcgacgaagtgctcgcgcgcatggacgaatgg
aacacccgcacccacggcaattccggcctgacccagcgtgtacgcgacagccgcatcagc
atggctgaggcagaagctgagaccattgctttcctggaaaagtgggtgccgaagggcaaa
tcgccgatctgcggcaacagcatctgccaggaccgtcgctttctttatacccacatgaag
gcgctggaaagctacttccactaccgcaacctcgacgtctcgacgctcaaggaactggcc
gcacgctgggctccggacgtgcgcgacagcttcaagaagggcagcacgcatctggcgctg
gacgacattcgcgaatcgatcgccgagttgcagcattaccgcaagcacttcatcaagttc
tga
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