KEGG   Pseudomonas atacamensis: JWU58_24835
Entry
JWU58_24835       CDS       T07336                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pata  Pseudomonas atacamensis
Pathway
pata03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pata00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    JWU58_24835 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pata03019]
    JWU58_24835 (orn)
   03009 Ribosome biogenesis [BR:pata03009]
    JWU58_24835 (orn)
Messenger RNA biogenesis [BR:pata03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JWU58_24835 (orn)
Ribosome biogenesis [BR:pata03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    JWU58_24835 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QSL87357
LinkDB
Position
complement(5470756..5471298)
AA seq 180 aa
MQNPQNLIWIDLEMTGLDPDNDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccgcagaacctgatctggatcgacctggaaatgaccggtctggacccggac
aacgatgtcatcatcgaaatggccaccatcgtcaccgacagtgagctgaatacattggcc
gaaggcccggtgatcgccatccatcacagcgacgaagtgctcgcgcgcatggacgaatgg
aacacccgcacccacggcaattccggcctgacccagcgtgtacgcgacagccgcatcagc
atggctgaggcagaagctgagaccattgctttcctggaaaagtgggtgccgaagggcaaa
tcgccgatctgcggcaacagcatctgccaggaccgtcgctttctttatacccacatgaag
gcgctggaaagctacttccactaccgcaacctcgacgtctcgacgctcaaggaactggcc
gcacgctgggctccggacgtgcgcgacagcttcaagaagggcagcacgcatctggcgctg
gacgacattcgcgaatcgatcgccgagttgcagcattaccgcaagcacttcatcaagttc
tga

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