Pseudomonas atacamensis: JWU58_24950
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Entry
JWU58_24950 CDS
T07336
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00730
Thiamine metabolism
pata01100
Metabolic pathways
pata01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JWU58_24950 (thiC)
Enzymes [BR:
pata01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JWU58_24950 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QSL87380
LinkDB
All DBs
Position
complement(5496553..5498442)
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AA seq
629 aa
AA seq
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MTTKEKNAINLSDSAKVDEQSVKPFTRSQKIYVQGSRPDIRVPMREISLDVTPTDFGGEI
NAPVTVYDTSGPYTDPDVVIDVRKGLADVRSAWIDDRGDTERLPGLSSNFGQQRLADAEL
TKLRFAHVNNPRRAKAGANVSQMHYARKGIITAEMEYVAIRENMKLQEARAAGLLKQQHA
GHSFGASIPKEITPEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGV
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKH
DVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
DAVDVDVAKGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaagaaaaaaacgcgatcaacctgagtgactcggccaaggtcgacgagcaa
tcggtcaagccgttcacccgttcgcaaaaaatctacgttcagggctcgcgcccggacatc
cgcgtgccgatgcgcgaaatcagcctcgatgtaaccccgaccgatttcggcggcgagatc
aacgccccggtcaccgtctacgacacctccggcccgtacaccgatccggacgtggtcatc
gatgtgcgcaaaggtctggccgatgtgcgttcagcgtggatcgatgaccgtggcgatacc
gagcgcctgccgggcctgagttcgaacttcggccagcagcgtctggccgatgccgaactg
accaaactgcgctttgcccacgtcaacaacccgcgccgggccaaggccggggccaacgtc
agccagatgcactacgcgcgcaaaggcatcatcactgccgagatggaatacgtcgccatc
cgcgaaaacatgaagctgcaagaggcccgcgcagccggcctgctcaagcagcagcacgcc
ggccacagcttcggcgcaagcattccgaaagaaatcacccctgaattcgtccgcgaagaa
atcgcccgtggtcgcgcgatcattccggccaacatcaaccacgtcgaactggaaccgatg
atcatcggccgtaacttcctggtgaagatcaacggcaatatcggcaacagcgccctgggt
tcttcgatcgaagaagaagtggcgaagctgacctggggcattcgctggggctcggacacg
gtgatggacctgtccaccggtaaacacattcacgaaacccgcgagtggatcatccgcaac
tcgccggtgccgatcggtaccgtgccgatttatcaggcgctggagaaggtcaatggcgtc
gctgaagacctgacctgggagctgttccgcgacaccctgatcgaacaggccgagcagggc
gtcgactacttcaccattcacgccggcgtgctcctgcgttacgtgccgctgaccgccaaa
cgcgtcaccggcatcgtctcccgtggcggttcgatcatggccaagtggtgcctggcgcac
cacaaagagaacttcctctacacccacttcgacgaaatctgcgaaatcatgaaggcctac
gacgtcagcttctcgctgggtgatggcctgcgtccgggctcgattgccgacgccaatgac
gaagcgcaattcggcgaactggaaaccctcggcgagctgaccaagattgcctggaagcac
gacgtgcaatgcatgatcgaaggcccgggccacgtgccgatgcagttgatcaaagagaac
atggacaagcagctcgaatgctgcgacgaggcgccgttctacaccctcggtccgctgact
accgacattgcgccgggctatgaccacatcacttccggtatcggcgcggcgatgatcggc
tggttcggttgcgcgatgctctgctacgtgacgccgaaggagcacctgggcctgccgaac
aaggatgacgtgaaaaccgggatcatcacttacaagatcgccgcgcatgcggcggacctg
gccaagggacatccaggcgcgcagatccgcgataacgcactgagcaaggcgcgtttcgaa
tttcgctgggaagaccagttcaacctcggcctggacccggacaccgcgcgctcctatcac
gacgaaaccctgccgaaggactcggccaaggtcgcgcatttctgctcgatgtgcgggccg
aaattctgctcgatgaagatcacccaggaagtccgcgagtatgcggccaaccagcgcatc
gacgcggtcgatgtggacgtcgccaaggggctagctgagcaggccgagcggttcaaacag
gaaggcagtcagctgtacaagaaagtctag
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