KEGG   Pseudomonas atacamensis: JWU58_25855
Entry
JWU58_25855       CDS       T07336                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pata  Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:pata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pata03016]
    JWU58_25855 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pata02048]
    JWU58_25855 (vapC)
Transfer RNA biogenesis [BR:pata03016]
 Prokaryotic type
  tRNA degradation factors
   JWU58_25855 (vapC)
Prokaryotic defense system [BR:pata02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    JWU58_25855 (vapC)
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: QSL87554
LinkDB
Position
5717179..5717577
AA seq 132 aa
MIKYMLDTNICIFTIKNKPQIVREAFNRHSGQLCISAITLMELIYGAEKSAAPEKNLGIV
EGFVARLDVLPFDNDAAAQAGMVRSELAKAGTPIGPYDQMIAGHARSLGLIVVTNNVREF
QRVSGLRIEDWV
NT seq 399 nt   +upstreamnt  +downstreamnt
atgatcaagtacatgctggatacaaatatctgcatcttcaccatcaagaacaaaccacaa
attgtccgggaagccttcaatcgacattccgggcagttgtgcatcagcgctatcacgctt
atggagcttatttacggtgctgaaaagtcggcggccccggagaaaaatctgggaattgtt
gaaggatttgtcgcgcgactggatgtcttgcctttcgataacgacgcagccgcacaggcc
gggatggttcgatctgaactcgcgaaggctggaacgccgatcgggccatacgaccaaatg
atcgctggccacgcacgctcacttggactcattgtagtgacaaacaacgtacgggagttt
caacgcgtttccggtttgcgaatcgaggactgggtttaa

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