Pseudomonas atacamensis: JWU58_26425
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Entry
JWU58_26425 CDS
T07336
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K14268
5-aminovalerate/4-aminobutyrate aminotransferase [EC:
2.6.1.48
2.6.1.19
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00250
Alanine, aspartate and glutamate metabolism
pata00310
Lysine degradation
pata00650
Butanoate metabolism
pata01100
Metabolic pathways
pata01120
Microbial metabolism in diverse environments
Module
pata_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JWU58_26425 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JWU58_26425 (gabT)
00310 Lysine degradation
JWU58_26425 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pata01007
]
JWU58_26425 (gabT)
Enzymes [BR:
pata01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
JWU58_26425 (gabT)
2.6.1.48 5-aminovalerate transaminase
JWU58_26425 (gabT)
Amino acid related enzymes [BR:
pata01007
]
Aminotransferase (transaminase)
Class III
JWU58_26425 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSL87662
LinkDB
All DBs
Position
complement(5840124..5841401)
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AA seq
425 aa
AA seq
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MSKTNAELMARRTNAVPRGVGQIHPIFAESAKNATVTDVEGREFIDFAGGIAVLNTGHVH
PKIIAAVTEQLNKLTHTCFQVLAYEPYVELCEKINAKVPGDFAKKTLLVTTGSEAVENAV
KIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALYPNELHGVS
IDDSIASIERIFKNDAEPKDIAAIIIEPVQGEGGFYVAPKEFMKRLRALCDQHGILLIAD
EVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA
GSPIACAAALAVMEVFEEEQLLDRCKAVGERLVTGLKAIQAKYPVIGEVRALGAMIAVEL
FENGDSHKPNPTAVAAVVAKARDKGLILLSCGTYGNVLRVLVPLTSPDEQLDKGLAIIEE
CFSEL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagactaacgctgaactgatggcccgccgcaccaatgccgtacctcgtggtgtt
ggccagattcacccgatcttcgccgagtcggcaaagaacgccaccgtgaccgacgttgaa
ggtcgtgagttcatcgacttcgccggcggtatcgctgtactgaacaccggccacgtgcac
ccgaaaatcatcgccgccgtgactgaacagctgaacaagctgacccacacctgcttccag
gtgctggcttacgagccctacgttgagctgtgcgaaaaaatcaacgccaaggtgccgggt
gatttcgccaagaaaaccctgctggtcaccaccggttccgaagccgtcgaaaacgccgtg
aagatcgcccgtgccgccactggccgcgctggcgtgatcgctttcaccggcgcttaccac
ggtcgcaccatgatgaccctcggcctgaccggtaaagtcgtgccgtactcggccggcatg
ggcctgatgccaggcggcatcttccgcgcgttgtacccgaacgaactgcacggcgtgagc
atcgacgattcgatcgcttccatcgagcgcattttcaagaacgatgccgagccgaaagac
atcgctgcaatcatcatcgagccagtgcagggcgaaggtggtttctacgtcgcgccgaag
gaattcatgaagcgtctgcgcgctttgtgcgaccagcacggcattctgctgattgcggac
gaagtgcagaccggcgctggccgtaccggcaccttcttcgccatggaacagatgggcgtt
gccgccgatctgaccactttcgccaagtctatcgctggcggcttcccgctggccggcgtg
tgcggcaaggctgagtacatggacgccatcgctccgggcggtctgggcggcacctacgcc
ggtagcccgatcgcttgcgccgctgcgctggcagtcatggaagtgtttgaagaagagcaa
ttgctggaccgctgcaaggctgtcggcgagcgcctggtcaccggtttgaaggcgattcag
gccaagtacccggtgatcggtgaagtgcgtgcgctgggcgcaatgatcgcggtcgagctg
ttcgaaaacggcgacagccacaagccgaacccgactgccgtggctgccgtggtggccaag
gcgcgtgacaagggcctgatcctgctgtcctgcggcacttacggtaacgtgctgcgtgtg
ctggttccgctgacgtcgccagacgagcaactggacaaaggcctggcgatcatcgaagag
tgcttctctgaactctga
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