Pseudomonas atacamensis: JWU58_26565
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Entry
JWU58_26565 CDS
T07336
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pata
Pseudomonas atacamensis
Pathway
pata02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JWU58_26565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_26565
02044 Secretion system [BR:
pata02044
]
JWU58_26565
Transporters [BR:
pata02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
JWU58_26565
Secretion system [BR:
pata02044
]
Type I secretion system
Adhesin protein transporter
JWU58_26565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
MMR_HSR1
DUF87
AAA_29
AAA_22
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
QSL87687
LinkDB
All DBs
Position
complement(5871223..5873379)
Genome browser
AA seq
718 aa
AA seq
DB search
MESEVSRVQLSHDPRALHDDPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVELLPR
AAARAGLQGRVLQRKLEEIPAIAMPALLLLKDGRSAVLLGWQGDDEARVLLSESDGGESV
VSRELLTDDYTGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASFLIN
IIAMAAPLFVMNVYDRVVPNQAEATLWVLALGITGAYIFDLILKSLRSLCLDLAGKKTDL
IISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTILIFIVI
AILGGHLVWIPVLAFPIALLIGYALQKPLIATMERTMALGAERQSSLIETLAGLDAVKVN
NAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYQIIAGNLS
MGGLIACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFEERPLSRKVL
QGAIECRQLSFTYPDQQNPALKNINLVIRPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDG
ALLVDGVDIRQIDVSELRYNIGYVPQDLQLLSGTLRDNLVSGARYVEDELVLQAAELAGV
HEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLMDEPTSAMDNTGEERL
KQRLAAVIENKTVVLVTHRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcagaagtcagtcgagttcaactcagccatgatccacgcgcgttgcatgacgat
ccgttgctggatggtctgctcgccctgtgcatgctgcaccagaagcctgccagcgcggcg
atgctgaccaccggcctgccgctgcccaaacaacgtttgagtgtcgagttgctgccgcgc
gcagcggctcgcgccgggctgcaggggcgggtgttgcagcgcaagcttgaagaaattccg
gcgatcgccatgcccgcgctgttgctgctcaaggatggccgcagtgccgtcctgctcggc
tggcagggcgacgacgaagcacgcgtactgctcagcgaaagcgatggcggcgagtcggtg
gtcagccgtgaactgctgaccgacgattacaccggcaaagtctttttcgcccagccgcag
cacaaattcgacgtcaaccacggcacgctgatcccgcgcgcacgctcgtggtttcgcgac
accctcaagcgttcgcgctggctgtacgccgatgcgatcgccgccagtttcctgatcaac
atcatcgccatggccgcgccgctgttcgtgatgaacgtctacgaccgcgtggtaccgaac
caggccgaagcaaccctttgggtgctggcgctgggcatcaccggcgcttacatcttcgac
ttgatcctcaagagcctgcgcagcctgtgcctggatctggccgggaagaaaaccgacctg
atcatctccgccacgctgttcgagcgcattgtcggcatggcgatgaaataccgcccggcg
cgggtcggcagctttgcccagaacatccacgagtttcagagcctgcgcgactttctcgcc
tcgctgaccctgaccagtctgatcgacctgccgttcaccatcctgattttcatcgtcatc
gccattctcggcgggcatctggtgtggattccggtgctggcgttcccgattgccctgttg
atcggctacgccttgcagaagccgctgatcgcgaccatggagcgcaccatggcgctgggc
gccgagcgccagtcgagcctgatcgaaaccctcgccggcctggatgcggtcaaggtcaac
aacgctgaaagcgagcgccagtatcagtgggagcagaccatcggcaccctcagccgtctc
gagctgcgagtgaaaatgctctccggtctggcaatgaacatcaccttgctgatccagcaa
ctggccggggtgatcatgatcgtcttcggcgtgtaccagatcatcgccggcaacctgagc
atgggcgggctgattgcctgctacatgctcagtggccgcgcgctgagcccgctggcgtcg
ctgtccggcctgctcacgcgctatcaacaggcgcgggtgaccatgacctcggtcgaccag
atgatggagctgccgcaggagcgcaacttcgaggagcgcccgctgagccgcaaggtgctg
cagggtgcgatcgaatgccgtcagctcagcttcacctacccggaccagcagaacccggcg
ctgaagaacatcaacctggtgatccgtcccggcgagaagatcggcatcatcggccgcagc
ggttcgggcaagagttcgctggcgaaactgctggtgggcctgtaccaaccggacgacggt
gccttgctggtcgacggcgtggacatccgccagatcgacgtcagcgaactgcgctacaac
atcggttacgtgccgcaggaccttcagctgctgtccggcaccctgcgtgacaacctggtg
tccggcgcgcgttacgtcgaagacgagctggtgctgcaagccgccgaactggccggcgtc
cacgaattcgcccgtctgcacccgcaaggctacgagctgcaagtcggcgagcgtgggcaa
aacctctccggcggtcagcggcagaacgtcgccctggcccgggcgctgttgctcaatccg
ccgattctgctgatggatgagccaaccagtgcgatggacaacaccggcgaagaacgcctc
aagcaacgcctcgcagcagtgattgaaaacaagaccgtggtgctggtcacgcaccgggca
tcgctgttgtcgctggtcgatcggctgctggtgatcgatcgcgggcaaattctcgccgac
ggcccgaaagccgccgtgatggaagcgttgaagaaggggcagatcagtgttgcttaa
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