Photobacterium atrarenae: NNL38_00085
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Entry
NNL38_00085 CDS
T10583
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pate Photobacterium atrarenae
Pathway
pate00071
Fatty acid degradation
pate00280
Valine, leucine and isoleucine degradation
pate00310
Lysine degradation
pate00362
Benzoate degradation
pate00380
Tryptophan metabolism
pate00410
beta-Alanine metabolism
pate00640
Propanoate metabolism
pate00650
Butanoate metabolism
pate00907
Pinene, camphor and geraniol degradation
pate00930
Caprolactam degradation
pate01100
Metabolic pathways
pate01110
Biosynthesis of secondary metabolites
pate01120
Microbial metabolism in diverse environments
pate01200
Carbon metabolism
pate01212
Fatty acid metabolism
Module
pate_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NNL38_00085 (fadB)
00650 Butanoate metabolism
NNL38_00085 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NNL38_00085 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NNL38_00085 (fadB)
00310 Lysine degradation
NNL38_00085 (fadB)
00380 Tryptophan metabolism
NNL38_00085 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NNL38_00085 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NNL38_00085 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NNL38_00085 (fadB)
00930 Caprolactam degradation
NNL38_00085 (fadB)
Enzymes [BR:
pate01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NNL38_00085 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NNL38_00085 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NNL38_00085 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NNL38_00085 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UTV27784
UniProt:
A0ABY5GEV9
LinkDB
All DBs
Position
1:complement(18027..20189)
Genome browser
AA seq
720 aa
AA seq
DB search
MIYQGETLSVSYLEDGIAELNLNAPGPINKFDLKTLECFNEALNALYQQPELKGLLLTSG
KDAFVVGADIKEFLGLFAKPADELSQWLSYANDIFNKLEDLPVPTLSAINGHALGGGCEC
VLATDFRLADNTARIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITAGKDKKAADALK
LGLVDGVVAPEALKEAALAMIKDAIAGKLDWQRRREQKKAPLALNKIEATMSFTMAKGMV
SQVAGPHYPAPITAVITIEEAVRSSRDEALAIENKHFVKLAKSDVAKALVGIFLNDQLLK
GNAKQAAKAGKATHKAAVLGAGIMGGGIAYQSALKGVPVLMKDIADASLELGMGEAAKLL
NKQLERGRIDGLKMAKVLSAIHPSLHYAGIEETDVVVEAVVENPKVKAAVLAEVEDQVGE
ETVIASNTSTIPINQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETIARVVAY
AAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGADFTKIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPDRMGKDYRDAVDVMYDAERFGQKNGKGFYAYTLDRKGKP
KKTVDPATADLLAPVVSHAAEFEADAIIARMMIPMINEVVRCLEEGIIASPAEADMALVY
GLGFPPFRGGVFRYLDTLGLANYVAMAEQYVHLGAVYEVPAGLKEKAAKGETYYHVQTNA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggtgaaaccctatccgtaagctatctggaagatggcattgcggagctt
aacctcaacgccccaggccctatcaacaagttcgatttaaaaaccctggaatgcttcaac
gaagccctgaatgccctataccaacagccagaactcaaaggcttgctgctaacttccggt
aaagatgcatttgttgtcggtgctgatatcaaagagtttctcggcctgtttgccaagcct
gcggacgagctgtcgcagtggctgagctacgccaatgacattttcaacaaactcgaagac
ctgccggtcccgacgttgtcggcaattaacggccatgccctgggcggcggttgcgagtgt
gtgctggcgaccgacttccgcctggcggacaacactgcccggatcggcttgccggaaacc
aagctggggatcatgcccggcttcggcggcaccgtacgcctgccacgcttgattggtgcc
gactccgcgatggaaatcatcaccgccggcaaagacaaaaaagcggctgatgccctcaag
ctgggcctggtcgatggtgttgtcgcaccggaagccctgaaagaagccgccctggccatg
atcaaagatgcgattgccggcaaacttgactggcagcgccgccgcgagcagaaaaaagcg
ccgttggccctgaacaaaattgaagcgaccatgagctttaccatggccaaaggcatggtc
agccaggtcgccggcccgcactacccggctccgatcaccgccgtgatcaccattgaagaa
gctgtccgcagcagccgcgatgaagcgctggccattgagaacaaacacttcgtcaagctg
gccaagtccgatgtcgccaaagccctggttggtatcttcctcaatgatcagctgctcaaa
ggcaatgccaaacaagcggccaaggccggcaaagcaacccacaaagcagccgtgctgggc
gccgggatcatgggtggcgggatcgcctaccagtccgccctcaaaggcgtgccggtgctg
atgaaggatatcgccgatgcatcactggagctaggcatgggcgaagcggcaaaactgctg
aacaagcaactcgagcgcggccgcatcgatggcctgaagatggccaaagtcctctcagct
atccatccgagcctgcactatgccggcattgaagaaaccgacgtggtggtggaagcggtg
gtcgagaacccgaaagtcaaagctgcagtgctggccgaagtcgaagatcaggtcggcgaa
gagaccgtgattgcctccaatacatccaccatcccgatcaaccaactggccaaatcgctg
aaacgcccggaaaacttctgcggcatgcacttctttaacccggtccaccggatgccgctg
gtcgagatcattcgtggcgagcacacctcggatgaaaccattgcccgcgttgtggcctat
gccgccaagatgggtaaatcaccgattgtcgtcaatgactgcccgggattcttcgtcaac
cgcgtcctgttcccgtactttgccggtttcagcctgctgatgcgcgacggtgccgatttc
accaaaatcgacaaggtgatggagaaacagttcggctggccgatgggcccggcttacctg
ctggatgtggtcggcattgataccgcgcaccatgcccaggccgtaatggccgaaggcttc
ccggatcgcatgggcaaagactaccgtgacgcggtggatgtaatgtatgacgccgagcgc
ttcggccagaaaaacggcaagggcttctatgcctacaccctcgatcgcaaaggcaaaccg
aagaaaaccgttgatccggcaactgccgacctgctggcgccggtcgtcagtcatgctgct
gagtttgaagccgatgccatcatcgcccggatgatgatcccgatgatcaacgaagtcgtc
cgctgcctggaagaaggcattattgccagcccggcagaagctgacatggcgctggtgtac
ggtctgggcttccctcctttccgcggcggtgtgttccgctacctcgataccctgggactg
gccaactatgtcgccatggctgagcagtacgtgcacttgggcgcagtctatgaagttccg
gccggcctgaaagagaaagccgccaagggtgaaacctattaccacgtgcagaccaacgct
taa
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