Photobacterium atrarenae: NNL38_00845
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Entry
NNL38_00845 CDS
T10583
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pate Photobacterium atrarenae
Pathway
pate00541
Biosynthesis of various nucleotide sugars
pate01100
Metabolic pathways
pate01250
Biosynthesis of nucleotide sugars
Module
pate_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NNL38_00845 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
NNL38_00845 (rfaD)
Enzymes [BR:
pate01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NNL38_00845 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
Core region
NNL38_00845 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
adh_short
Phage_T7_Capsid
NAD_binding_10
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UTV27906
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Position
1:complement(174760..175704)
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AA seq
314 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEQGRNDILVVDNLKDGTKFANLVDLDIADYMDKEDFITQI
MAGDEFGPIDAVFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLERQIPFLYASSAATY
GGRDHDFIEEKPYEGALNVYGYSKQQFDNYVRRLWQDAEAHGETLSQITGFRYFNVYGPR
EQHKGSMASVAFHLHTQLSKGENPKLFEGSDSLKRDFVYVGDVCKMNLWFWEQGVSGIFN
CGTGKAESFTEVAKAVVKYYGKGEVEEIPFPEHLKGRYQKFTQADLTKVRAAGYPHEFKS
VAEGVAEYMALLDN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggtggcgccggtatgatcggcagcaacattgtcaaagcgctgaac
gagcaaggtcgcaacgatattctggtggtcgacaacctcaaagacggcaccaagttcgcc
aacctggttgacctcgatatcgccgattacatggataaggaagacttcatcacccagatc
atggccggcgatgagttcggcccgattgatgccgtatttcatgaaggcgcctgctctgca
accacggagtgggacggcaaatacatgatgctgaacaattatgaatattcaaaggagctg
ttgcactactgcctggagcgtcagatcccgttcctgtatgcgtcttctgctgccacgtac
ggcggccgcgaccatgatttcatcgaagaaaaaccgtatgaaggtgccctgaacgtctac
ggctactccaagcagcaatttgacaactacgtccgtcgcctgtggcaggatgccgaggcc
cacggtgaaaccctgtcgcagatcaccggctttcgctacttcaacgtttacgggccgcgc
gagcagcataaaggcagcatggcctcggtcgcattccacctccatacccagctcagcaag
ggcgaaaacccgaaactgttcgaaggctcggacagcctcaagcgcgactttgtctacgtc
ggtgatgtctgtaaaatgaacctgtggttctgggaacaaggtgtctccggcatcttcaac
tgcggcaccggcaaagccgagtctttcactgaagtcgccaaagccgtggtgaaatactac
ggtaaaggggaagtggaagaaatcccgttcccggagcacctgaaaggccgctaccagaaa
tttacccaggccgatctgaccaaggtccgcgccgccggttatccgcacgaattcaagtcg
gttgccgaaggcgtggcggagtatatggccctgctggataactaa
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