Photobacterium atrarenae: NNL38_01910
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Entry
NNL38_01910 CDS
T10583
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pate Photobacterium atrarenae
Pathway
pate00010
Glycolysis / Gluconeogenesis
pate00020
Citrate cycle (TCA cycle)
pate00260
Glycine, serine and threonine metabolism
pate00280
Valine, leucine and isoleucine degradation
pate00310
Lysine degradation
pate00380
Tryptophan metabolism
pate00620
Pyruvate metabolism
pate00630
Glyoxylate and dicarboxylate metabolism
pate00640
Propanoate metabolism
pate00670
One carbon pool by folate
pate00785
Lipoic acid metabolism
pate01100
Metabolic pathways
pate01110
Biosynthesis of secondary metabolites
pate01120
Microbial metabolism in diverse environments
pate01200
Carbon metabolism
pate01210
2-Oxocarboxylic acid metabolism
pate01240
Biosynthesis of cofactors
Module
pate_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pate_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pate_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pate_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NNL38_01910 (lpdA)
00020 Citrate cycle (TCA cycle)
NNL38_01910 (lpdA)
00620 Pyruvate metabolism
NNL38_01910 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NNL38_01910 (lpdA)
00640 Propanoate metabolism
NNL38_01910 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NNL38_01910 (lpdA)
00280 Valine, leucine and isoleucine degradation
NNL38_01910 (lpdA)
00310 Lysine degradation
NNL38_01910 (lpdA)
00380 Tryptophan metabolism
NNL38_01910 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NNL38_01910 (lpdA)
00670 One carbon pool by folate
NNL38_01910 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pate04147
]
NNL38_01910 (lpdA)
Enzymes [BR:
pate01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NNL38_01910 (lpdA)
Exosome [BR:
pate04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NNL38_01910 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
UTV28099
LinkDB
All DBs
Position
1:386344..387768
Genome browser
AA seq
474 aa
AA seq
DB search
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLIEKYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKAMADHGVVFGEPQTDINKIRVWKEKVINQLTGGLGGMAKMRKVNVVNGYGKFT
GPNTIVVEGEENTTITFDNAIVAAGSRPIELPFIPHEDPRIWDSTDALELKEVPEKLLVM
GGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRIKKKFNLMLETKVTAV
EAKEDGIYVSMEGKKAPAEPVRYDAVLVAIGRVPNGKLIDAEKAGIEVDERGFINVDKQM
RTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVG
KTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKMIFDKDTHRVIGGAIVGTNGGEL
LGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAVKRK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaattaaagcccaggtagtggtgttgggttcaggccctgctggttactct
gcggcgttccgttgcgcagacttgggtctggaaacagtcctgatcgaaaaatacagcacc
ctgggtggtgtttgtctgaacgttggctgtattccttcaaaagcgctgctgcacgtagct
aaagtgattgaagaagccaaagcgatggctgatcacggtgtggtattcggtgagcctcag
accgatatcaacaagatccgtgtgtggaaagaaaaagtaatcaatcaactgaccggcggt
cttggcggcatggctaagatgcgtaaagtcaacgtggtgaacggttacggtaagtttacc
ggcccgaacaccatcgtggttgaaggcgaagaaaacaccacgatcacgttcgataacgcg
atcgttgcggcaggctctcgtccaatcgagctgccattcatcccgcacgaagatccacgc
atctgggattcaacagacgcgctggagctgaaagaagttcctgaaaaactgctggtcatg
ggcggcggtatcatcggcctggaaatgggtacggtttaccacgcactgggctctcagatc
gacgttgttgaaatgttcgaccaggtgatccctgcagcagacaaagatatcgtgaaagtc
ttcaccaagcgcatcaagaagaaattcaacctgatgctggaaacgaaagtgaccgcggtt
gaagccaaagaagacggtatctacgtgtcaatggaaggcaagaaagcccctgctgagcca
gttcgttacgacgcagtgctggttgcgatcggccgtgtaccaaatggtaagctgatcgac
gctgagaaagcgggtatcgaagttgacgagcgcggtttcatcaacgttgataagcaaatg
cgtaccaacgtgcctcacatctttgcgattggtgacatcgttggtcaaccaatgctggcg
cacaaaggtgtgcatgaaggccatgtggcggcagaagtgatctcgggtaagaagcactac
ttcgacccgaaagtgatcccttcaattgcttacaccgagccagaagtggcatgggttggt
aagactgagaaagaagcgaaagcggaaggcatcaactacgaagttgcaaccttcccttgg
gcggcatctggccgtgccatcgcctctgactgtgctgacggtatgacgaagatgatcttc
gacaaagacacccaccgtgtgatcggtggtgcgatcgtcggtaccaacggtggcgagctg
ctgggcgaaatcggcctggcgatcgagatgggctgtgatgcagaagacatcgccctgacc
atccacgctcacccgacgctgcacgagtctgtgggcctggctgctgaagtgttcgaaggt
tcgatcactgacctgccgaacccgaaagcggtcaagcgtaagtaa
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