KEGG   Photobacterium atrarenae: NNL38_01910
Entry
NNL38_01910       CDS       T10583                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pate  Photobacterium atrarenae
Pathway
pate00010  Glycolysis / Gluconeogenesis
pate00020  Citrate cycle (TCA cycle)
pate00260  Glycine, serine and threonine metabolism
pate00280  Valine, leucine and isoleucine degradation
pate00310  Lysine degradation
pate00380  Tryptophan metabolism
pate00620  Pyruvate metabolism
pate00630  Glyoxylate and dicarboxylate metabolism
pate00640  Propanoate metabolism
pate00670  One carbon pool by folate
pate00785  Lipoic acid metabolism
pate01100  Metabolic pathways
pate01110  Biosynthesis of secondary metabolites
pate01120  Microbial metabolism in diverse environments
pate01200  Carbon metabolism
pate01210  2-Oxocarboxylic acid metabolism
pate01240  Biosynthesis of cofactors
Module
pate_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pate_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pate_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pate_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pate00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NNL38_01910 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NNL38_01910 (lpdA)
   00620 Pyruvate metabolism
    NNL38_01910 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NNL38_01910 (lpdA)
   00640 Propanoate metabolism
    NNL38_01910 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NNL38_01910 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NNL38_01910 (lpdA)
   00310 Lysine degradation
    NNL38_01910 (lpdA)
   00380 Tryptophan metabolism
    NNL38_01910 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NNL38_01910 (lpdA)
   00670 One carbon pool by folate
    NNL38_01910 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pate04147]
    NNL38_01910 (lpdA)
Enzymes [BR:pate01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NNL38_01910 (lpdA)
Exosome [BR:pate04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NNL38_01910 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 Thi4 FAD_binding_3 DAO
Other DBs
NCBI-ProteinID: UTV28099
LinkDB
Position
1:386344..387768
AA seq 474 aa
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLIEKYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKAMADHGVVFGEPQTDINKIRVWKEKVINQLTGGLGGMAKMRKVNVVNGYGKFT
GPNTIVVEGEENTTITFDNAIVAAGSRPIELPFIPHEDPRIWDSTDALELKEVPEKLLVM
GGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRIKKKFNLMLETKVTAV
EAKEDGIYVSMEGKKAPAEPVRYDAVLVAIGRVPNGKLIDAEKAGIEVDERGFINVDKQM
RTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVG
KTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKMIFDKDTHRVIGGAIVGTNGGEL
LGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAVKRK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtaaagaaattaaagcccaggtagtggtgttgggttcaggccctgctggttactct
gcggcgttccgttgcgcagacttgggtctggaaacagtcctgatcgaaaaatacagcacc
ctgggtggtgtttgtctgaacgttggctgtattccttcaaaagcgctgctgcacgtagct
aaagtgattgaagaagccaaagcgatggctgatcacggtgtggtattcggtgagcctcag
accgatatcaacaagatccgtgtgtggaaagaaaaagtaatcaatcaactgaccggcggt
cttggcggcatggctaagatgcgtaaagtcaacgtggtgaacggttacggtaagtttacc
ggcccgaacaccatcgtggttgaaggcgaagaaaacaccacgatcacgttcgataacgcg
atcgttgcggcaggctctcgtccaatcgagctgccattcatcccgcacgaagatccacgc
atctgggattcaacagacgcgctggagctgaaagaagttcctgaaaaactgctggtcatg
ggcggcggtatcatcggcctggaaatgggtacggtttaccacgcactgggctctcagatc
gacgttgttgaaatgttcgaccaggtgatccctgcagcagacaaagatatcgtgaaagtc
ttcaccaagcgcatcaagaagaaattcaacctgatgctggaaacgaaagtgaccgcggtt
gaagccaaagaagacggtatctacgtgtcaatggaaggcaagaaagcccctgctgagcca
gttcgttacgacgcagtgctggttgcgatcggccgtgtaccaaatggtaagctgatcgac
gctgagaaagcgggtatcgaagttgacgagcgcggtttcatcaacgttgataagcaaatg
cgtaccaacgtgcctcacatctttgcgattggtgacatcgttggtcaaccaatgctggcg
cacaaaggtgtgcatgaaggccatgtggcggcagaagtgatctcgggtaagaagcactac
ttcgacccgaaagtgatcccttcaattgcttacaccgagccagaagtggcatgggttggt
aagactgagaaagaagcgaaagcggaaggcatcaactacgaagttgcaaccttcccttgg
gcggcatctggccgtgccatcgcctctgactgtgctgacggtatgacgaagatgatcttc
gacaaagacacccaccgtgtgatcggtggtgcgatcgtcggtaccaacggtggcgagctg
ctgggcgaaatcggcctggcgatcgagatgggctgtgatgcagaagacatcgccctgacc
atccacgctcacccgacgctgcacgagtctgtgggcctggctgctgaagtgttcgaaggt
tcgatcactgacctgccgaacccgaaagcggtcaagcgtaagtaa

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