Photobacterium atrarenae: NNL38_02680
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Entry
NNL38_02680 CDS
T10583
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pate Photobacterium atrarenae
Pathway
pate02024
Quorum sensing
pate03060
Protein export
pate03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NNL38_02680 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NNL38_02680 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NNL38_02680 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pate02044
]
NNL38_02680 (ffh)
Enzymes [BR:
pate01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NNL38_02680 (ffh)
Secretion system [BR:
pate02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NNL38_02680 (ffh)
Eukaryotic Sec-SRP protein
NNL38_02680 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
KTI12
AAA_33
AAA_26
AAA_31
T2SSE
APS_kinase
AAA_14
AAA_30
Fe-ADH_2
DUF5696
AAA_16
YqeC
Motif
Other DBs
NCBI-ProteinID:
UTV28217
UniProt:
A0ABY5GG84
LinkDB
All DBs
Position
1:530063..531430
Genome browser
AA seq
455 aa
AA seq
DB search
MFENLSERLSRTLKNISGRGRLTDDNIKDTLREVRMALLEADVALPVVRDFVKRVKERAV
GTEVSKSLTPGQEFIKIVQAELEQVMGESNEDLNLASQPPAVILMAGLQGAGKTTSVGKL
GKLLKERQKKKVLVVSADVYRPAAIKQLETLAGDIGIEFFPSSPDQKPVDIANAAVDHAK
RKFFDVLIVDTAGRLHVDSEMMDEIKDVHQALNPVETLFVVDAMTGQDAANTAKAFDEAL
PLTGVVLTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLERNVDKDQAEQLAKKFKEKKGFDLEDFRSQLQQMKKMGGMMGMLDKLPGMSQL
PDNVKDQVDDKQFVQMEAIINSMTPGERERPELIKGSRKKRIALGSGTQVQDVNRLLKQF
TQMQKMMKKMQKGGMKNMMRNMKGMMPGGGMFPGR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaatttatcggagcgtttatcgcgaacgctcaagaatatcagcggccgcggt
cgcctgacggacgacaacatcaaggatacgctgcgtgaagtacgtatggcgttactcgaa
gccgatgttgcgcttcctgttgtccgtgatttcgtcaagcgcgtgaaagagcgtgcggtt
gggacggaagtttccaaaagcctgaccccggggcaggagttcattaagattgttcaggct
gagcttgagcaggtcatgggtgagtccaatgaagatctgaacctggccagccagccaccg
gcggtgatcctgatggccggtttgcagggtgccggtaaaaccaccagtgtcggtaagctg
ggtaaattgctcaaagagcgccagaagaagaaggtgctggtggtgtctgccgacgtctac
cgtccggcggcgatcaagcagctggaaaccctggcgggcgatatcggcattgagttcttc
ccgtcaagtccggaccagaagccggtcgatattgccaacgcggcggtggatcatgccaaa
cgcaagttctttgatgtcctgattgtcgataccgcgggtcgccttcatgttgacagcgaa
atgatggacgaaattaaagacgtccatcaggcgctcaacccggttgaaaccctgttcgtg
gtcgatgcgatgacgggtcaggatgcggcgaataccgccaaggcctttgacgaagcgctg
ccgctgaccggtgtggtgctgaccaaggtcgacggtgatgcccgcggcggtgccgcgctg
tcggtgcgccatatcaccggcaagccgatcaagttccttggtgtgggtgagaaaaccgat
gccctggagccgttccatccggatcgggtcgcttcccgtatcctcggcatgggtgatgtg
ctgtcgctgatcgaagatctggaacgcaacgtcgataaagaccaagcggaacagctggcg
aagaaattcaaagagaagaaaggtttcgatctggaagatttccgcagtcagttgcagcag
atgaaaaagatgggcggcatgatgggcatgctggacaagctgccgggcatgtcgcaactg
ccggacaatgtcaaagaccaagtggatgacaaacagttcgtgcagatggaagctatcatt
aactcgatgacaccgggagagcgtgagcgacctgagctgatcaagggctcgcgcaagaaa
cggattgccctcggctctggtactcaggtgcaggatgtgaaccgtctgctgaagcagttt
acccagatgcagaagatgatgaaaaagatgcagaagggcggaatgaagaacatgatgcgc
aatatgaagggcatgatgccgggcggcgggatgttcccgggccgttaa
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