Photobacterium atrarenae: NNL38_03075
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Entry
NNL38_03075 CDS
T10583
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pate Photobacterium atrarenae
Pathway
pate03030
DNA replication
pate03430
Mismatch repair
pate03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NNL38_03075 (dnaE)
03430 Mismatch repair
NNL38_03075 (dnaE)
03440 Homologous recombination
NNL38_03075 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pate03032
]
NNL38_03075 (dnaE)
03400 DNA repair and recombination proteins [BR:
pate03400
]
NNL38_03075 (dnaE)
Enzymes [BR:
pate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NNL38_03075 (dnaE)
DNA replication proteins [BR:
pate03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NNL38_03075 (dnaE)
DNA repair and recombination proteins [BR:
pate03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NNL38_03075 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UTV28285
UniProt:
A0ABY5GHM2
LinkDB
All DBs
Position
1:617292..620771
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPRFIHLRVHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYNAAHGA
GMKPIIGADFKVRSDEMGDDLTDLTILAADNDGYRNLTLLISEAYQRGHIQHLPVIDKEW
LVEHRQGLILLSGGKRGDVGQALLKGNQKMAERLVSFYQAHFPDSYYLELTRTGRPDEEA
YLHFAIELAEQMALPVVATNDVRFISPDQFDAHSIRVAIHDGYTLADPNRPQLYSAQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLNEYFLPNFPTGDLSTEDFLIKKSKEGL
ERRLAFLFPDEEERQQRRPEYDERLDIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALDITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMDKRDLVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPAEPGMTLAKAFEAEPQ
LQESYDADEEVRDLIDMCRVLEGVTRNAGKHAGGVVISPTTITDFAPLYCDAEGHHPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGMVNPRLEAQGKPPVNIAAIPMDDAKSFAML
QRSESTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
VSYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRAIFEEGAIKNGVDGELAMRIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKIVGLVDECHRMKLELLPPDVNKGLYRFNVDDNGAIVYGIGAVKG
VGEAPIENIIAAREKGGHFKDLFDFCARIDTKKVNKRVLERLIKCGAMDRLGPNRAAMMA
SLDDAIKAASQHHQAEAFGQTDMFGVLTEAPEEVEHAYANIPEWPEKVWLEGERETLGLY
LTGHPINAYVPELKHYTTWRLKDAHPTGRDKVVTVAGLVIAARVMTTKRGTRIGLLSLDD
RSGRMEVMLFSDALERYLDLVEKDRILVVSGQVSFDDFNGGLKMSAREVLDISEAREKHL
RGLAISVTERQIDEQFFERFSKVLEPHRAGTVPVNMYYQRSDARAKLTLGTEWRVTPADQ
LITDLKVLLGEKQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgctttattcatcttcgtgtccacagtgatttctcaatggttgacggc
ctgtcaaaggtcccgccgctggtcaaaaaagtcgccgcgatgggcatgccggccatggcg
ctgaccgactttaccaacctgtgtgggctggtgaagttttacaatgctgcccatggcgcc
gggatgaaacccatcatcggggcggactttaaagtccgctcagacgaaatgggtgatgac
ctgacagacctgacgattctggcggcagacaatgacggctaccgcaacctgaccttgttg
atctcagaagcctaccagcgcggccatatccagcacctgccggtgatcgacaaggaatgg
ctggtcgagcaccgtcaggggttgatcctgctctccggcggcaaacggggtgatgttggc
caggctttgctcaaaggcaaccagaaaatggccgagcgtctggtgtcgttttaccaggcg
cactttcccgacagttattatctggagctgacccggaccggtcgcccggatgaagaagcc
tatctgcactttgcgattgaactggccgagcaaatggccttgccggtggtggcgaccaac
gatgtgcgctttatctcgccggatcagtttgatgcccactcgattcgggtggcgatccat
gacggctacaccctggccgatccgaaccggccgcagctgtacagcgctcagcaatatctg
cgcagcgaagaagaaatgtgcgagctgtttgctgatattccggaagcattggaaaacagc
gtcgaaattgccaagcggtgtaacgtgaccgtgcggttgaatgaatacttcctgccgaac
ttcccgaccggggatctgagtaccgaagatttcctgatcaaaaagtccaaagagggcctt
gaacgacgtctggccttcctgtttccggatgaagaagagcgccagcagcgccgtccggaa
tatgatgagcgcctcgatatcgagctggaagtgattaaccagatggggtttccgggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacgggatcccggtcggaccg
ggccggggctctggtgccggctccctggtggcttacgcgctggatatcacggatctggat
ccgctcgaattcgacctgctgttcgaacgtttcctcaacccggagcgggtctccatgccc
gatttcgatatcgacttctgtatggacaagcgggatctggtgatcgaccacgtggctgaa
atgtacggccgggatgcggtgtcccagatcatcaccttcggcaccatggcggctaaggca
gtgatccgtgatgttggccgggtgctgggtcacccgtacggatttgtcgaccggatctcc
aaattggtaccggctgagccagggatgaccctggccaaggcgtttgaggctgagccgcag
ttacaggagtcgtatgacgcggacgaggaagtccgggatctgatcgatatgtgccgggtg
ctggaaggggtgacccgaaacgccgggaaacacgccggtggggtcgtgatttcacccacc
accattaccgactttgcgccgctgtactgcgacgctgaaggccaccacccggtgacccag
ttcgacaagaacgacgttgaaaccgccgggctggtcaaattcgacttcctcggcctgcga
accctgactattatcgactgggcgctggggatggtgaacccacgtctggaagcgcagggc
aagccgccggtgaacattgctgcgatcccgatggatgacgcaaaatctttcgccatgctg
cagcgatcggagtccactgcggtgttccagctcgaatcgcgcgggatgaaagatctgatc
aagcgtctccagccggactgctttgaagacatgatcgccctggtggcgttgttccgtccg
gggccactgcaatcgggcatggttgataacttcattgatcggaagcacggccgagaggcg
gtgtcgtatccggatgaaaagtggcaacacgaatcgctgaaagagatccttgagccgacc
tacggcatcatcctgtatcaggagcaggtgatgcagatcgcccaggtgctggccggttat
accctgggtggtgcggatttgctgcgccgggcgatgggtaagaaaaaaccggaagagatg
gccaagcaacgggcgattttcgaagaaggtgcgatcaagaacggcgtcgacggcgagctg
gcgatgcggatcttcgacctggttgagaaatttgccgggtatggtttcaacaaatcccac
tccgcagcctacgcgctggtgtcgtatcagacgctgtggctcaaggcgcactatccggct
gaattcatggcggcggtgatgactgccgatatggataataccgataagatcgtcggcctg
gtagacgagtgccaccggatgaagctcgagctgctgccgccggatgtcaacaaggggctg
tatcgctttaacgttgatgataacggcgccattgtatacggcatcggtgcggtgaaaggg
gtcggtgaagcgccgattgagaatattattgctgcccgcgagaaaggcggccactttaaa
gatctgtttgatttctgtgcccggattgacaccaagaaagtcaacaagcgggtgctggag
cggctgatcaagtgtggcgccatggatcgcctgggcccgaaccgggcggcgatgatggcc
tcgctggatgatgcgattaaagcggcgagccagcatcaccaggctgaagccttcggccag
accgatatgtttggggtcctgaccgaagcgccggaagaagtcgagcacgcctatgccaat
attccggagtggcccgagaaagtctggctcgaaggcgagcgcgaaaccctcggcctgtat
ctgaccgggcacccgatcaacgcttatgtcccggaactcaagcactacacgacctggcgc
ttgaaggacgcccacccgaccgggcgggataaagtggtgacggttgccgggctggtgatt
gccgcccgggtgatgaccaccaagcgcggtacccggattggcctgctgagcctggacgac
cgttccgggcggatggaagtgatgttattttccgatgcgctggaaagatacctagatttg
gtcgagaaagatcgcattttggtcgtttccggacaggtcagctttgatgattttaacggt
ggccttaaaatgtcggcgcgagaagtgcttgatatctcagaagccagagaaaagcatttg
cgaggtcttgccatctctgtgacggagaggcaaattgatgaacagttttttgagcgtttc
agcaaagtgctggagccgcaccgcgcaggtactgtgccggtaaatatgtactatcagcgc
tctgatgcgcgcgccaaattgaccctcgggaccgagtggcgcgtcaccccggccgatcag
ctaattactgatctcaaagtcttgctgggtgaaaagcaggtagagcttgagtttaattaa
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integrated database retrieval system
