Photobacterium atrarenae: NNL38_03630
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Entry
NNL38_03630 CDS
T10583
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pate Photobacterium atrarenae
Pathway
pate00541
Biosynthesis of various nucleotide sugars
pate01100
Metabolic pathways
pate01250
Biosynthesis of nucleotide sugars
Module
pate_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NNL38_03630 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
NNL38_03630 (kdsA)
Enzymes [BR:
pate01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NNL38_03630 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
Lipid A
NNL38_03630 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UTV28357
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All DBs
Position
1:710104..710958
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AA seq
284 aa
AA seq
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MMEQKVVRVGDIEVANDKPFVLFGGMNVLESRDLAMQICEKYVEVTDKLGIPYVFKASFD
KANRSSVHSYRGPGMEEGLKIFQELKDTFGVKIITDIHEQYQAQPVADVVDVIQLPAFLA
RQTDLVQAMAKTGAVINVKKPQFMSPGQVGNIVEKFAECGNEQIILCERGALHGYDNLVV
DMLGFDVMKKASNGSPIIFDVTHALQCRDPLGAASGGRREQTVDLARAGIATSIGGLFME
AHPNPDQARCDGPSAFPLDKLEPFLAQLKQLDDLIKSFVPIDIK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacagaaagttgttcgagtcggtgatattgaggtcgccaacgacaagccgttt
gtcctgttcggcggcatgaatgtcctggagtctcgcgatctggcaatgcagatctgtgaa
aagtatgtcgaagtgacggacaaactggggatcccatacgttttcaaagcctctttcgac
aaggccaaccgctcttctgtccactcttaccgtggaccgggaatggaagaaggcctgaaa
atctttcaggagctcaaagataccttcggcgtcaaaatcatcactgatattcacgagcaa
tatcaggcgcagcctgtggccgatgtagtcgatgtgatccaactgccagctttcctggca
cgccagaccgatctggttcaggcgatggccaaaaccggcgcggtgattaacgtcaagaaa
ccgcagttcatgagcccgggccaggtggggaacatcgtcgagaagtttgccgagtgcggc
aatgagcaaatcattctgtgtgagcgcggtgcgctgcacggttacgataacctggtcgtc
gacatgctgggctttgatgtgatgaagaaggcatcgaatggcagcccgatcatctttgat
gtcacccacgccctgcagtgccgtgatccgttgggcgccgcttccggtggtcgtcgcgag
cagaccgttgatctggcccgcgccgggatcgcaaccagcatcggtggcctgtttatggaa
gcccacccgaatccggatcaggcccgttgcgacggtccgtccgcgttcccgttggataaa
ttagaaccgttcctggcccagttgaaacagctggacgatctgatcaagagctttgtcccg
attgatatcaagtaa
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