Photobacterium atrarenae: NNL38_03880
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Entry
NNL38_03880 CDS
T10583
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pate Photobacterium atrarenae
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pate03009
]
NNL38_03880 (ycaO)
Ribosome biogenesis [BR:
pate03009
]
Prokaryotic type
ribosomal protein modification factors
NNL38_03880 (ycaO)
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Motif
Pfam:
YcaO
YcaO_C
UPF0728
Motif
Other DBs
NCBI-ProteinID:
UTV28400
UniProt:
A0ABY5GGK8
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All DBs
Position
1:complement(767515..769272)
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AA seq
585 aa
AA seq
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MQTFIPGKDAALEESIARFQSKLQALGFNIEEASWLNPVPNVWSVHIRDVDAPMNFTNGK
GATKKAALASALGEYFERLATNYFYADYYLGQDIANSAFVHYPNEKWFPVDLEENLPPED
ILDERLTQFYDPTLELLGTDLIDLQSSNLERGICALPFERQSDQATIYIPMNIIGNLYVS
NGMSAGNTKTEARTQGLSEVFERKIKNRIIAEHISLPEIPAGVIERYPGIKASIDALEAE
GFPIYCYDASLGGKYPVICVVLFNPQNNTSFASFGAHPRFEVAFERTVTELLQGRSLKDL
DVFPEPSFDKDEVSDHHNLETHFIDSSGLISWDLFKADADFDFVNWNFSGTSEEEFNHLL
AILHEEGTDAYIADYDHLGVDCCRIIVPGWSEIYPVEELIEANNNVALELRETLLALPAM
ELEAEQYAELYHILEEEGFDDFNRLYEIVGLVPQAGDAWQTLRIGELKCLLALAGGDLEL
ALEQANWCVDYNVSTYSAERARFFRCLVSSLKLALDDDRDPAQYKATFERMFGADTVAAA
WGSIEGTTRFYGLTAGDLSLSQFPAHQKLLASYHKLQAAKQAAMK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacatttattcccggaaaagacgccgcgttggaagagtccatcgcgcgcttccag
tccaaacttcaagcgctggggttcaatatcgaagaagcctcttggttaaacccggtgccg
aatgtctggtcggtgcatatccgggatgtcgatgccccaatgaacttcaccaacggcaaa
ggcgcaaccaagaaagcagccctggcttcagccctgggtgagtacttcgagcggctggcg
accaactacttctatgcggactactacctgggccaggacatcgccaacagcgcgttcgtc
cattacccgaatgaaaagtggttccctgtcgatctggaagaaaacctgccgccggaagat
atccttgatgaacgcctgacccagttctatgatccgacgctggagctgctgggcaccgat
ctgatcgatctgcagtcaagcaacctggaacgtgggatctgcgcgctgccatttgagcgc
cagagcgatcaggccaccatctatattccgatgaacatcatcggcaacctgtatgtctcc
aatggcatgtccgccggcaataccaagaccgaagcccgtacccagggcctgtccgaagtg
ttcgagcgcaagatcaagaaccgcatcatcgccgaacatatcagcctaccggaaatcccg
gccggcgtgattgagcgctatccggggatcaaagcctccattgatgcgctcgaagcggaa
ggcttccctatctattgttatgatgcctcgctgggcggcaaatacccggtgatctgcgtg
gtgctgttcaacccgcagaacaataccagctttgcttcattcggtgcccacccgcgcttt
gaagtggccttcgagcggaccgtcaccgagctgctgcaaggccggagccttaaagatctc
gacgtgttcccggaaccgtctttcgacaaggatgaagtcagtgatcaccacaacctggaa
acccacttcatcgactcttccggcctgatttcctgggatctgttcaaagcagatgctgac
tttgactttgtcaactggaacttcagcggcacatcagaagaagaattcaaccacctgctg
gccattttgcatgaagaagggaccgatgcttacatcgccgactacgaccacctgggggtc
gactgctgccggatcatcgtgccgggctggtctgagatctatccggtcgaagagctgatc
gaagccaacaacaacgttgccctcgagctgcgcgaaaccctgctggcactgccggcgatg
gagctggaagccgagcagtacgccgagctgtaccacattctcgaagaagaaggctttgat
gatttcaaccgcctgtacgaaattgtcggcctggtgccgcaggccggcgatgcctggcag
accctgcgcatcggcgaactaaaatgcctgctggcactggccggcggcgatctggagctg
gccctggagcaggccaactggtgtgtcgactacaacgtctccacctacagcgccgagcgt
gcccgtttcttccgctgcctggtctccagcctcaagctggcgctggacgatgaccgcgat
ccggcccagtacaaagcgaccttcgagcggatgttcggcgccgacaccgtcgcggcggcc
tggggctccattgaaggcaccacccgcttctacggcctgactgccggcgatttgagtctg
agccaattcccggcacaccaaaaattgctggcctcttaccataagctgcaagcagcgaaa
caggctgcaatgaagtaa
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