Photobacterium atrarenae: NNL38_04090
Help
Entry
NNL38_04090 CDS
T10583
Name
(GenBank) SmdB family multidrug efflux ABC transporter permease/ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pate Photobacterium atrarenae
Pathway
pate02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NNL38_04090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pate02000
]
NNL38_04090
Transporters [BR:
pate02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NNL38_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
DEAD
AAA_16
DUF4191
DUF87
SbcC_Walker_B
Mg_chelatase
AAA_25
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UTV28435
LinkDB
All DBs
Position
1:812419..814203
Genome browser
AA seq
594 aa
AA seq
DB search
MTDHTINKAVLRRLLSYALDDPKKLGYAILLLLVASLADVSGPWLIQHFIDHYIARDQYP
LDMVAGLALAYVALMLTAAWFRYKQSLQFNQIAISVVQRVRKQLFERMINQPLSAFDYMP
TGKLVSRITNDTESIKDFYVFVIGTVLKNVVLIAVMLVVMCLLSPRLAAVVAVLLPVVMA
IMVIYQRKSADAYRTMRDLLADINASMSESIQGMSLIQLMRQEQAFSQQFSVLTRRHLAS
QIGVMKLNGLLLRPLIDFLSGVALLSLVALFGVSGTELIGVGVLYAFISYLGRVTEPLIE
LTQQLSLLQQAMVASERIFGFIDARQQAYGDDTRPLASGQLACRNVSFSYDGQQSVLDGI
DVELPHRGFLALVGHTGSGKSTLASLMMGFYPLTEGELTLDGRPLASLAQSVLREGIAMV
QQDPHVLSDTVRENVRLGRAVSDDDIWQALEKVGLAGQIRLYDAGLDTRLGSGEANLSAG
QKQLLALARVLVARPKILILDEATANIDSGTEHQIQQALQILRQDMSIVVIAHRLSTIIE
ADEILVLSRGQIIERGNHPQLLTQQGHYWQMYQLQQAGEHLHKLEESAGVPEAS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcataccatcaataaggccgtgttgcggcggctgcttagctacgcactggat
gatcccaaaaagctgggttatgccatcttgctgctgctggtcgcttcactcgctgatgtg
tctggcccttggctgatccagcactttattgatcattatatcgcccgtgatcagtatccg
ctggatatggtagcaggactggcgctggcctatgtggccctgatgctgacggcggcctgg
tttcgctacaaacagtcgctgcagtttaaccagattgcgatcagcgtggtgcagcgggtg
cgcaagcagctgttcgagcggatgatcaaccagccgttgtcggcgtttgactatatgccg
accggcaaactggtatcgcggatcaccaatgatacggagtcgatcaaagacttttatgtc
ttcgtcatcggcaccgtactgaagaatgtggtgttgatcgccgtgatgctggtggtgatg
tgcctgctgagccctaggctggccgctgtggtcgctgtcttgctgccggtcgtgatggca
atcatggtgatttaccagcgcaaaagtgccgatgcctaccggaccatgcgtgatttgctg
gccgatatcaatgcctcgatgagcgagtcgattcagggcatgagcctgatccagctgatg
cgccaggagcaggcgttcagccagcagttttcggtgctcacccgacgtcacctggcttcg
caaattggggtgatgaagcttaatggcctgctgttgcggccgttgatcgactttctatcc
ggggtggccttgctatcgctggtggccctgttcggtgtcagtggcacggagctgatcggg
gtcggggtgctgtatgcattcatcagttatctcggccgggtgaccgagccgctgatcgag
ctgacccagcagctgtctttattgcagcaggccatggtcgccagtgagcggatcttcggc
tttatcgatgccaggcagcaggcatatggcgatgatacccggccgctggcatccggccag
ttggcttgccgcaatgtctcgttcagttatgacggtcagcaatcggtgctggacgggatt
gatgtcgagctgccgcatcgtggcttcctggcgttggttggtcataccggcagcggcaaa
agtacgctggcgtcgctgatgatgggcttctatccgctgaccgagggagagctgacgctg
gatggccggccgttggcttcgctggctcagtctgtgctgcgtgaaggcatcgctatggtg
cagcaggacccgcatgttctcagtgataccgtgcgggaaaacgttcgcctcggtcgggcg
gtgagtgatgatgatatctggcaggcactggagaaagtcggactggcggggcaaatccgc
ctgtatgacgcgggcttggatacccggttggggagcggcgaagccaatttatccgccggg
cagaaacagttgctggcactggcccgggtactggtggcccggccgaagatcctgatcctc
gatgaggcgacagccaatattgactccgggaccgagcatcagatccagcaggcgctgcag
atattgcgtcaggatatgagtatcgtggttattgcccaccggctgtcgaccatcatcgag
gccgatgaaatactggtgctgagccggggacagatcatcgaacgcggtaatcacccgcag
ctgctgacgcagcagggccattattggcagatgtatcagctgcaacaggctggtgagcat
ttgcataagctcgaagaatcggcaggcgtgccggaggcgtcataa
DBGET
integrated database retrieval system
