Photobacterium atrarenae: NNL38_04305
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Entry
NNL38_04305 CDS
T10583
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pate Photobacterium atrarenae
Pathway
pate03030
DNA replication
pate03430
Mismatch repair
pate03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NNL38_04305 (dnaX)
03430 Mismatch repair
NNL38_04305 (dnaX)
03440 Homologous recombination
NNL38_04305 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pate03032
]
NNL38_04305 (dnaX)
03400 DNA repair and recombination proteins [BR:
pate03400
]
NNL38_04305 (dnaX)
Enzymes [BR:
pate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NNL38_04305 (dnaX)
DNA replication proteins [BR:
pate03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NNL38_04305 (dnaX)
DNA repair and recombination proteins [BR:
pate03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NNL38_04305 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_4
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_16
ResIII
AAA_18
TsaE
AAA_2
AAA_7
Mg_chelatase
AAA_assoc_2
nSTAND3
PIF1
AAA_24
Rad17
Motif
Other DBs
NCBI-ProteinID:
UTV28476
UniProt:
A0ABY5GH20
LinkDB
All DBs
Position
1:860592..862829
Genome browser
AA seq
745 aa
AA seq
DB search
MSYQVLARKWRPHQFSDVVGQSHVLTALANALAHNRLHHAYLFSGTRGVGKTTIARIFAK
GLNCEQGITATPCGQCETCREIDDGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHLDN
TQIQTQLEHVLGEEGVAYEPRALSLLARAAEGSMRDALSLTDQAIALGDGQVQAESVSAM
LGTLNTEQALYLLEAMAAGEAQPAMACLEELAGVGVEWDSLLQELAAQLHRVAMVQALPA
SLDESAPDAERIIALSKQITPQEVQLCYQIALQGRQDLAYAPDGRTGLEMVLLRMLAFRP
VASAGIAPQAVSVPATEPAPQPQSGIAQPQPGMAQPMTHSGQAQSTTPNPAPQAMQRVQA
LKNQVSAQPIDTGQSVMPEGQPVPQSEAPRPPATHQSSPQVQSAAPAQQAAQQSALQAGQ
PSMQPSEQPTPQPQPQPQSSAASGLLAARNTLRSHTKRGQDGQPDVKKGQPAPAKKVATN
VLDRIASKHSGQPASANGAPAMPASTPAQQPTSPSEQEYRWQPVSQPVPETVKAEVAPAV
LKRALEHEKTPEMAKLLVKEAANQDSWSDLVTQLNVGRLVQQLALNSALLREDNQVTLLL
RPSQKHLDTPKAREQLVQALSALYEAPIELSIELSDKGRSPLEWREAIYQQKLDQAKQSL
HNDPNVTFICQRFSAVLDEESVRPI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccaggttctggcacggaaatggcggccacaccaattctcggatgttgtcggg
caatcccatgtgctgacggcgctggcgaatgctcttgcccacaaccgtctccatcatgct
tatctattcagcgggacccgtggtgtcgggaagaccaccatcgcccgaatttttgccaaa
ggtctgaactgtgagcaagggatcacggcgaccccttgtggccagtgtgaaacctgccgc
gagatcgatgacggacgttttgttgatctgctcgaaatcgatgcggcttcccggaccaaa
gtggaagacacccgtgagctgctcgataacgtgcagtacaaacccgcccggggccggttt
aaggtttacctgattgacgaggttcatatgctctctcgtcatagttttaacgccttgctg
aaaaccctggaagagccgccggaatatgtgaagttcattctggcgacgacggatccccag
aaactgccggtgacgattctgtcgcgctgtttgcagttccatctcaaacatttggacaat
actcagatccagactcagctggagcatgtgctgggcgaggaaggggtggcgtatgagccg
cgagccctgagcctgctggcccgtgccgccgaaggcagtatgcgtgatgccctgagcctg
accgatcaggcgattgccctgggggatggccaggttcaggccgaatcagtttctgccatg
ctcgggacgctgaataccgagcaggcgctgtatctgctcgaagccatggctgctggtgaa
gcgcagccggccatggcttgtctggaagagttagccggtgtcggggttgagtgggacagc
ttgcttcaggagctggcagcacaattgcatcgggttgccatggttcaggcgttgcctgcc
tcacttgatgagagcgcaccggatgctgagcgtattatcgccctgagcaaacagatcaca
ccgcaggaagtgcaactgtgttatcagattgcactccaggggcggcaggatttggcttat
gctcctgacggccggaccgggctggagatggtgttgttacggatgctggcctttcggccg
gtggccagcgccgggatagcgccgcaagcggtcagtgtgccggcgaccgagccggcgccc
cagccacaatccggtatagctcagccacagccgggtatggcgcagccgatgactcattcg
ggccaggcgcagagcacgacaccaaaccctgcgccgcaggccatgcaacgagtgcaggcg
ctgaaaaatcaggtgtcagcacagccaatagatactggtcagagtgttatgcctgaaggg
cagcctgtaccgcaatctgaagccccaaggcctcctgctacgcatcagtcctcccctcag
gtacagtctgctgcgccagcgcaacaagcagcgcaacagtcagccctgcaagcgggacag
ccttcgatgcaaccgtcggaacaaccgaccccgcagccgcagccgcagccgcagtcatca
gccgcttccggcttgctggcggcgagaaatacgctgcgcagccacactaaacgtggccag
gacgggcagccagatgtaaaaaagggccaaccggcgccagctaaaaaagtcgcaaccaat
gtgcttgaccgaattgcatccaagcactcgggtcagcctgcttcagcgaatggagcacct
gcgatgccggcgtcgacacctgcgcagcaacccacttcaccgagcgagcaagagtaccgc
tggcaacccgtctctcaaccggtgccggagacggtgaaggctgaggtggcacccgccgtg
ttaaagcgcgcgctggagcatgaaaaaacgccggaaatggcaaaattacttgtcaaagaa
gcggcaaatcaggatagttggagcgatttagtgacccaactgaatgttgggcgactggtg
cagcaactggcgctgaattctgcgctgctccgggaagacaatcaagtgaccttgttgctc
cggccgtcgcaaaaacacctggatacgccgaaggcacgggagcaactggttcaggcacta
tccgcgttgtatgaggcgccgatcgaattatcaatcgaattaagtgataaagggcgctcg
ccgctggaatggcgagaagcgatttatcagcaaaaactggatcaggccaaacagagtttg
cacaatgatccgaacgtgacctttatctgtcagcgtttttctgctgtgcttgatgaagag
agcgtcagacctatttag
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