Photobacterium atrarenae: NNL38_04460
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Entry
NNL38_04460 CDS
T10583
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pate Photobacterium atrarenae
Pathway
pate00020
Citrate cycle (TCA cycle)
pate00190
Oxidative phosphorylation
pate00650
Butanoate metabolism
pate00720
Other carbon fixation pathways
pate01100
Metabolic pathways
pate01110
Biosynthesis of secondary metabolites
pate01120
Microbial metabolism in diverse environments
pate01200
Carbon metabolism
Module
pate_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pate_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pate_M00149
Succinate dehydrogenase, prokaryotes
pate_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NNL38_04460 (sdhA)
00650 Butanoate metabolism
NNL38_04460 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NNL38_04460 (sdhA)
00720 Other carbon fixation pathways
NNL38_04460 (sdhA)
Enzymes [BR:
pate01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NNL38_04460 (sdhA)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UTV28505
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All DBs
Position
1:894397..896163
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AA seq
588 aa
AA seq
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MSIAVREFDAVVIGAGGAGMRAALQISEQGLKCALLSKVFPTRSHTVSAQGGITVALGNS
HPDNWQWHMYDTVKGSDYIGDQNAIEYMCKNGPKSVIELEKMGLPFSRFDNGSIYQRPFG
GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTIFSEWYALDLVKNQDGAILGC
TALCMETGEICYFKSKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREG
RGCDGPWGPHIKLKMDHLGKDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQNAAGDDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLAAQAEARPATDSDIEASLARVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGEAM
ATGLEELKVIRERLKDARLDDTSTEFNTQRIECLELENLMETAFATAVAANYRTESRGAH
ARYDFPDRDDANWLCHSIYNPETEQMSKRDVNMTPVHREAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagcattgcagttcgtgaatttgatgctgtcgtaatcggtgctggtggtgcagggatg
cgcgccgcgctacagatttcagaacaagggctgaaatgtgccttgttgtctaaagttttt
ccaacccgctcgcacacggtttcggcgcagggcgggatcactgttgccctggggaactca
cacccggataactggcagtggcatatgtacgataccgtcaaaggctctgattacatcggt
gatcagaatgcgattgaatacatgtgtaaaaatggcccgaaatccgtgattgagctggaa
aaaatgggtctgcctttctctcgttttgataacggcagcatttaccagcgcccattcggt
ggtcagtcaaaagaatttggcggcgagcaggctgcgcggacggcggcggccgccgaccgg
accggccatgcactgctccacacgctgtatcagcaaaatatcaagcacaaaaccacgatt
ttctctgagtggtatgcgttggatctggtgaaaaaccaagatggcgctatcttgggctgc
acggccctatgcatggaaaccggtgagatttgttacttcaagtccaaggcgacgatcctg
gccaccggtggtgcaggccgtatttaccagtcgacaacgaatgctcacattaacaccggt
gacggtgttggtatggcactgcgtgccggggttccgatgcaggacatggaaatgtggcag
ttccacccgaccgggattgccggtgccggggttctggtgaccgaaggttgtcgtggtgaa
ggtggctatctgctgaacaaagacggcgagcgctttatggagcgttatgcgccgaatgcc
aaagacttggctggccgcgatgtcgtcgctcgctcgatgatggttgaaattcgcgaaggc
cgtggctgcgatggcccttggggtccacacatcaaactgaagatggatcacctgggtaaa
gatgttctggaatcgcgcctgccggggatctgtgagctgtctcgtaccttcgcccacgtt
gatcctgtgaaagagccgattccggtgatcccaacctgtcactacatgatgggtggtgtc
ccgacccaggtttcgggccaggcgatcaagcaaaatgctgccggtgacgacgttgaagta
cagggcctgtttgcctgtggtgagattgcttcggtttctgtccacggcgctaaccgcctg
ggtggtaactccctgcttgacctggtggtcttcggtcgtgcaaccggtctgcacctgggt
gaaaccctggcagcccaagctgaagcgcgccctgcaactgactctgacattgaagcttct
ttggcgcgtgtcaaccgctggaacagtacccagaaaggtgaagatccggtccaaatccgt
aaggatctgcaatcttgcatgcaaaacaacttctcggtattccgtgaaggtgaagcgatg
gcgactggtctggaagagctgaaagtgatccgtgagcgcctgaaagatgctcgtctggac
gacacgtcaacagaattcaacacccagcgcattgaatgcctggagttggagaacctgatg
gaaacggcatttgcgacggctgtagcggcgaactaccgtactgagagccgtggcgcccat
gcccgttatgacttccctgatcgtgacgatgcaaactggttgtgtcactccatttacaac
cctgagacagagcaaatgtcgaagcgtgatgtaaacatgacaccggttcatcgtgaggca
tttccgccgaaagcgcgtacttactaa
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