KEGG   Photobacterium atrarenae: NNL38_04865
Entry
NNL38_04865       CDS       T10583                                 
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
  KO
K00426  cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
Organism
pate  Photobacterium atrarenae
Pathway
pate00190  Oxidative phosphorylation
pate01100  Metabolic pathways
pate02020  Two-component system
Module
pate_M00153  Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:pate00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    NNL38_04865 (cydB)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NNL38_04865 (cydB)
Enzymes [BR:pate01000]
 7. Translocases
  7.1  Catalysing the translocation of protons
   7.1.1  Linked to oxidoreductase reactions
    7.1.1.7  quinol oxidase (electrogenic, proton-motive force generating)
     NNL38_04865 (cydB)
SSDB
Motif
Pfam: Cyt_bd_oxida_II
Other DBs
NCBI-ProteinID: UTV28582
LinkDB
Position
1:990719..991855
AA seq 378 aa
MFEYEVLRFIWWVLIGVLCIGFAITDGFDMGVGVLSKIIGKTDTERRVMINSIAPHWDGN
QVWLITAGGALFAAWPLVYATAFSGFYLAMVVTLAALWLRPIGFDYRSKIENPQWREMWD
KAIFVGSFVPPVIFGVAFGNLLQGVPFELSDLLIPTYKGTFFGLLNPFALLCGIISLLMI
VTQGAAYLQMKTTAELRERSRRVAMLISLAMAACFVIAGFMAQSIEGYIITSEIVTNAPS
NPLTKEVMRQTGALFANYDAYPLLWIAPALAVFMPLLTVLASRANRGALAFISSSLTMAG
VVLTFGFALFPFIMPSSLVPNHSLTMWDATSSELTLNIMTGVAAVMVPIILAYTSWCYYK
MFGRLDTQYIEDNKNSLY
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgtttgaatatgaagtattgcgattcatctggtgggtactgatcggtgtgctttgcatc
ggtttcgccatcaccgatggatttgatatgggtgtcggtgtgctgtctaaaattattggt
aagacagataccgagcgccgcgtcatgattaactcgatcgccccgcactgggacggtaac
caggtatggctgatcaccgccggtggtgccctgttcgcggcttggccgctggtgtacgct
acagcgttctctggcttctacctggccatggttgtgacgctggcggcgctgtggctgcgt
ccgatcggttttgactaccgctcgaaaattgaaaatccgcagtggcgtgaaatgtgggac
aaagcgatctttgtcggtagctttgtaccgccggtgatctttggtgtggcgttcggaaac
ctgctgcaaggggtcccgtttgagctgagcgatctgttgatcccgacttataaagggact
ttcttcggtctgctgaacccgtttgccctgttgtgcggcatcatcagcctgctgatgatc
gtgacccaaggcgcagcgtacctgcagatgaagaccacggctgagctgcgtgagcgttcg
cgtcgcgtggcgatgctgatctcgctggcgatggccgcctgttttgtgattgccggcttc
atggcgcaaagcattgagggctacatcattacctctgagattgtgaccaatgcgccgtct
aatccgctgaccaaagaagtgatgcgtcagaccggtgcgctgtttgccaactatgatgct
tatccgctgttgtggattgctccggcactggcggtatttatgccgttgctgacagtcctg
gcctcgcgtgccaatcgtggtgcgctggccttcatctcatccagtctgactatggcgggt
gtggtgctgacctttggcttcgccctgttcccgttcattatgccgtcaagcctggtgcca
aaccacagcctgaccatgtgggatgccacgtcttctgagctgacgctgaacatcatgacc
ggtgtcgctgcggtgatggtgccgattatcctggcgtacacatcctggtgttactacaag
atgtttggtcgtcttgatacgcaatacatcgaagacaacaagaactcactgtactaa

KEGG   Photobacterium atrarenae: NNL38_09460
Entry
NNL38_09460       CDS       T10583                                 
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
  KO
K00426  cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
Organism
pate  Photobacterium atrarenae
Pathway
pate00190  Oxidative phosphorylation
pate01100  Metabolic pathways
pate02020  Two-component system
Module
pate_M00153  Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:pate00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    NNL38_09460 (cydB)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NNL38_09460 (cydB)
Enzymes [BR:pate01000]
 7. Translocases
  7.1  Catalysing the translocation of protons
   7.1.1  Linked to oxidoreductase reactions
    7.1.1.7  quinol oxidase (electrogenic, proton-motive force generating)
     NNL38_09460 (cydB)
SSDB
Motif
Pfam: Cyt_bd_oxida_II
Other DBs
NCBI-ProteinID: UTV26595
LinkDB
Position
1:complement(1988024..1989022)
AA seq 332 aa
MDYALIWYMLIAIAVFAYVALDGFDLGIGILFLGGESVQERDLMMNSVAPVWDGNETWLV
LGGGGLFAVFPLAYSVVMPALYAPLIMMLLGLIFRGVAFEYRFRTHRGQFLWDSSFFIGS
LIATFTQGMMLGTLLQGIAVVDRQYSGGWFDWFTPFTVFCGLVTVAAYTLLGACWLLIKL
PKPYHRRYYVTAKRCALIMVVMVAILSLWLPISNHEIAARWFSFPQALLFLLIPAGSGYL
VYLLFKDLIEHKPVKAYLASLGLFFLASLGFGVSTYPYIVPHSLTYAEAAAPDTSLKFLL
TGTVFLLPLIIAYTAYSYWVFRGRLKEGEGYH
NT seq 999 nt   +upstreamnt  +downstreamnt
atggattatgcattgatctggtacatgctgattgccatcgcggtgtttgcttatgttgcg
ctggatggattcgacttagggatcgggatcttgtttctcggcggtgagtcggttcaggag
cgggatctgatgatgaacagtgttgcgccggtctgggatggcaatgaaacctggctggtg
ctgggtggtggcggcttgtttgccgtctttccactggcctattccgtggtgatgccggcg
ctgtatgcgcccttgatcatgatgctactgggactgatcttccgtggtgtggcatttgag
tatcgctttcgtacccatcgcggccaattcctgtgggacagctcctttttcatcggttcg
ctgattgccacgtttacccaggggatgatgttggggactttgttgcaagggatcgccgtg
gtggatcggcagtacagcggcggctggtttgactggtttacgccgtttactgtgttttgc
ggattggtgacggttgccgcctacaccttgttaggtgcctgctggctgttgatcaagttg
ccaaagccttatcatcgccgttattacgtgacggccaagcgctgcgcactgatcatggtg
gtgatggtggcgatcctcagcctctggctgccgatctccaatcatgaaatcgcagcgcgg
tggttctcgtttccgcaagctttgctgtttttactgatcccggctggctctggctacctg
gtttatttgctgttcaaagatctgatcgagcataaaccggtgaaggcctatctggcgagc
ctggggctgtttttcctcgcttcgctggggtttggggtcagtacctatccttacattgtg
ccgcatagcctgacgtatgcagaagctgcggcgccggataccagcctgaagttcctgtta
accggaaccgtgttcctgctgccgttgatcatcgcctataccgcttattcttattgggtg
ttccgcggtcggctcaaagaaggggaggggtatcattaa

KEGG   Photobacterium atrarenae: NNL38_19385
Entry
NNL38_19385       CDS       T10583                                 
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
  KO
K00426  cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
Organism
pate  Photobacterium atrarenae
Pathway
pate00190  Oxidative phosphorylation
pate01100  Metabolic pathways
pate02020  Two-component system
Module
pate_M00153  Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:pate00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    NNL38_19385 (cydB)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NNL38_19385 (cydB)
Enzymes [BR:pate01000]
 7. Translocases
  7.1  Catalysing the translocation of protons
   7.1.1  Linked to oxidoreductase reactions
    7.1.1.7  quinol oxidase (electrogenic, proton-motive force generating)
     NNL38_19385 (cydB)
SSDB
Motif
Pfam: Cyt_bd_oxida_II
Other DBs
NCBI-ProteinID: UTV30726
LinkDB
Position
2:747573..748580
AA seq 335 aa
MGIELAVIWFGIIIFATLMYITMDGFDLGIGILMPLVRDKDDRDLMVNTVAPVWDGNETW
LVLGGAGLFGAFPLAYAVIVDALTIPLSIMLIALIFRGVAFEFRFKALPNHRAFWDKAFI
IGSIVATFCQGVTVGAVIQGFPVVGRSFAGGAFDWLTPFTLFCGLGLVVTYALLGATWLI
KKTEGDLQRRMYQATTPLLAAFAIAIVVVSLWTPLAYPQIAERWFSLPNLYFLAPVPLLS
LFCLWRITTAVKRGGQTSPFVMALLLTFLGFSGLGISLWPNIIPPEISIWEAAAPPQSLG
FMLVGALFIIPFILVYTYWSYSVFSGKVKAGEAYH
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgggtattgaacttgccgtgatctggttcggcattattattttcgccaccctgatgtat
atcaccatggacggctttgatttgggcatcgggatcctgatgccgctggtccgcgacaaa
gacgatcgggacttgatggtcaacaccgtcgccccggtctgggacggcaatgagacctgg
ctggtgctcggcggcgccgggctgttcggtgcattcccgctggcttacgcggtgatcgtc
gacgccctgaccatcccgctttccatcatgctgattgccctgatcttccgaggtgtggcc
tttgagtttcgtttcaaggcgctgccaaaccaccgcgccttctgggacaaagcgtttatc
atcggctcgatcgtcgccaccttctgccagggcgtgaccgtcggcgcggtaatccagggc
ttcccggtcgtcggacgcagttttgccggcggcgcgtttgactggctgacaccgttcacg
ctcttttgcggcctggggctcgtggtgacttacgccctgctgggcgccacctggctgatc
aaaaaaactgaaggcgacctccagcgccggatgtatcaggccaccacgccgctgctggcc
gcctttgcgattgccatagttgtcgtcagcctgtggacgccgctggcctatccgcagatt
gccgagcggtggttcagcctgccgaacctgtacttcctggcaccggtaccgctgctttcc
ctgttctgcctgtggcggatcaccacggcggtgaaacgcggcggacaaaccagcccattc
gtgatggcgctgctgctgacattcctcgggttcagcggcttagggatcagcctgtggccg
aatatcattccgccggaaatcagcatctgggaagctgccgcaccaccacaaagcctggga
ttcatgctagtcggggccctgttcatcatcccgtttattctggtgtacacctactggagc
tactccgtattcagcggcaaggtgaaagccggggaagcctatcactga

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