Photobacterium atrarenae: NNL38_05670
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Entry
NNL38_05670 CDS
T10583
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pate Photobacterium atrarenae
Pathway
pate00541
Biosynthesis of various nucleotide sugars
pate01100
Metabolic pathways
pate01250
Biosynthesis of nucleotide sugars
Module
pate_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NNL38_05670 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
NNL38_05670 (kdsB)
Enzymes [BR:
pate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NNL38_05670 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
Lipid A
NNL38_05670 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
eRF1_3
Motif
Other DBs
NCBI-ProteinID:
UTV28735
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Position
1:1192609..1193355
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AA seq
248 aa
AA seq
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MAFTVIIPARYQSSRLPGKPLADIGGKPMIQWVYEQASKAGAEQVIVATDDQRIVDVVKG
FGGEVCLTRADHESGTERLAEVVEQYQLADDQIVVNVQGDEPLIPESIIRQVADNLARSD
APMATLAVEIDQADEVFNPNAVKVVTNQDGYAMYFSRASIPWDRDNFAKRPQEIHHNLMR
HIGIYAYRAGFINTYINWEPSALEKIEALEQLRVLWYGEKIHVEVAIDAPPAGVDTPEDL
EKVRQLIG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcacggtgattatcccggcacgttaccagtcctcccgcctgccgggcaagccg
ctggcggatatcggcggcaagccgatgatccagtgggtttatgagcaggcgagcaaagcc
ggtgccgagcaggtgatcgtcgccaccgatgatcagcgcattgtcgatgtcgtcaaaggc
ttcggcggtgaggtttgcttgacccgtgccgatcacgaatccggcaccgagcgtctggcc
gaggtggtcgagcaataccaactggctgatgatcagattgtggtgaatgttcagggcgat
gagccgctgatcccggaatccattatccgccaggtggcagataatctggcccgtagcgat
gcgccgatggcgacgctggcggtggaaattgatcaggccgatgaagtgttcaatcccaat
gcggtgaaagtggtcaccaaccaggacggctacgcgatgtatttcagccgggcctcgatc
ccctgggaccgtgataactttgccaagcgcccgcaggagatccatcataacctgatgcgc
catatcgggatctatgcctatcgcgccgggtttatcaatacttacatcaactgggagccg
agcgcgctggagaaaatcgaagcgctggagcagctgcgggtgctgtggtacggcgagaaa
atccatgttgaagtcgcgattgatgcgccgcctgcgggcgttgatacgccggaagatctg
gaaaaggtccgtcagctgattggctga
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