KEGG   Photobacterium atrarenae: NNL38_08895
Entry
NNL38_08895       CDS       T10583                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pate  Photobacterium atrarenae
Brite
KEGG Orthology (KO) [BR:pate00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pate02044]
    NNL38_08895 (tssC)
Secretion system [BR:pate02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NNL38_08895 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 HTH_VMAP-M9
Other DBs
NCBI-ProteinID: UTV26494
UniProt: A0ABY5GBC3
LinkDB
Position
1:complement(1856924..1858414)
AA seq 496 aa
MSTSTLTTHDTDRSEESISLLEQAISATKQTDSSRAEELLRTLTQEALKGTVTWNKNLTV
TFREAIAAIDTAISSQLAEIMHHEQLQKLEGSWRGLNYLVMNSNTSQTLKIRMLNMSKKE
LHKDLSKAVEFDQSQIFKKVYEAEFGTPGGEPYGALIGDYEFTNHPEDIETLSLMSNVAA
AGFSPFLSAASPALFGFDEWTELAKPRDLEKVFESLEYTKWRSFRESADSRFVTLTMPRV
LARLPYGEATAPVEAFRYEEFQVDEESGLSVKADHDDYCWMNASYVMGAKLTDAFAKYGF
CTAIRGAEGGGRVDNLPSHIFLSDDGDPDLKCPTEIGITDRREAELGKLGFLPLCHYKNT
NYAVFFGAQTCQKPEQHNNPDATANAAISARLPYMMATSRFAHYLKVMARDKIGSYMEAE
EVEAWLNRWILSYVNASEGGGQEIRAKYPLADAKVKVKEIPGQPGVYNAIAWLRPWLQME
ELTTSLRLVAKIPDIG
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagtactagcactttaactacgcatgatacggatagatccgaggaaagcatctctctg
cttgagcaagctatttctgcaacgaaacaaacagatagctcccgcgccgaagaattgctg
cgtacgcttacccaagaagcgctgaaggggactgttacctggaataaaaacctgactgtc
acgttcagagaagcgattgctgcaattgacacagcgatttcttctcaacttgctgaaatt
atgcaccatgaacaattacagaagcttgagggcagttggcgtgggctgaactacctggtc
atgaactcgaataccagccagacgctgaagatccgtatgctcaatatgagcaaaaaagag
cttcataaagatttgagtaaggcagttgagtttgatcaaagccagatattcaaaaaggtc
tatgaagcggagtttggtactccgggtggcgaaccctatggcgcgcttatcggtgattac
gagtttaccaaccaccctgaagatattgaaaccttgagtttaatgtctaatgtggccgca
gccggattttcgccatttttatcagcagcctcgccagctttgttcggctttgatgaatgg
actgagcttgcgaagcctcgtgacttggagaaagtcttcgaatcacttgaatacacaaag
tggcgttcgttcagagaaagtgcagactcccgctttgtaaccctgacgatgccacgtgtg
cttgctcgtttaccatatggtgaggctactgcacctgttgaagcgttccgatatgaagaa
tttcaggtcgatgaagagtcgggcctgtctgtaaaagcagatcatgacgattactgctgg
atgaatgcctcttatgtgatgggggccaagctgacagacgcctttgccaagtacggattc
tgtaccgcaattcgtggtgcagaaggaggtggtcgtgttgacaatttgccttcacacatt
ttcttgagtgatgacggcgatccggacttgaaatgtccgacagaaatcggaattacggat
cgtcgtgaagctgaactgggtaaactaggcttcctgccactttgccactacaagaatacg
aactatgcagtgttcttcggtgcccaaacttgtcaaaagcctgagcagcataataatccg
gacgcgactgcgaacgcggcaatttcggcacgcttaccctatatgatggcgacgtcccgg
tttgcgcattacctgaaagtgatggcgcgtgacaagattggcagttacatggaagcggaa
gaagttgaggcttggctgaatcgctggatcctgtcgtatgtgaatgcgtctgaaggtggc
gggcaggaaatccgtgctaaatatccgcttgctgatgccaaagtaaaagtgaaagagatt
ccggggcagccgggtgtatacaatgcgattgcttggctgcgtccttggttacagatggaa
gaactgacaacgtctttacgtctagtcgcaaaaattccagatattggataa

DBGET integrated database retrieval system