KEGG   Photobacterium atrarenae: NNL38_08920
Entry
NNL38_08920       CDS       T10583                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pate  Photobacterium atrarenae
Pathway
pate03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pate00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NNL38_08920 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pate02044]
    NNL38_08920 (tssM)
Secretion system [BR:pate02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NNL38_08920 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical FAM165 DUF4131 AAA
Other DBs
NCBI-ProteinID: UTV26499
LinkDB
Position
1:complement(1861550..1865101)
AA seq 1183 aa
MFYRFIHYLKAVLYSKWAITLIGLLALSFLIWFGGPLIAIAGSEPFSSPIVRLVIILCLT
FFWAGINIYQAKKEKRSNEENVNSLLNISSEEEDKEGIDHEIDTLRARITKAISILKTSS
LLKGKSLYELPWYILIGPPGTGKTTALYNSGLEFPLKDQLGDDPLAGVGGTRHCDWWFTN
KAILIDTAGRYTTQNSNAKLDSKAWLGFLGLLKKYRTQKPINGAIITISLTSLMNDTPTE
RTLQARAIKQRLQELKNRLGMNFPVYVIFTKADLVAGFNEFFEGLSQEQREQVFGITLPE
QSSEDEQGVVSQFNREFHRILENLTQQINEKVFNVADKEKRLLIYEFPKQLRMLQAAADD
LLKIIFSPNSFEEPPMLRGIYLVSATQKGTPIDKVISEATHSLGMGEVSLHQHGGQSKGY
FVKNLFEQVIFPEQDAGTLNRIHERNSLLIRRCVIGASCLLLVTSTVLWSLSYRWNMLYV
DKTEEVLDEFDLITGSGLSKDTDIVSLVKALDYLKQSPNSISKSLDGEVVVAKNLGLYQG
DKIGEPLNVAYYRVLKEHFSPYITSALIHDMNQKQSYLEYLYETLKTYLMLFDSSRFNKE
QVLSWYVQYYGRNYPGEINADLRTSLLVHTDAMLESGVRTADYDDDSVRVAREALSELPL
SERAYQRLKLDYKSSHIPDFRITNVIGSDSHNIFYRESGKKLSEGIPGLYTYNGFHSIFQ
LENQRIVKRLMEDSWIYGDEEIELSKITNDEIMKEVESKYYQEYIFVWEKLISDLRLKEF
DSASEGIDIVSVLSGSERPIQNMIYAIQKQLKLSTLPAGDEVTKAAKIATHAADVALENK
KSRIERYLPVSESNARGDLPGEVVEDYFSEILDATESDLKQINYSLSTLESELLNIANVR
SGKVNQLPLIGTSNNTEINSAFRKLRDTLPEPFSYWLVEAHNKTTQLSKEGTQSQLNDIW
QDQVYREYKKAIRGKYPLSPNARHEVKLKDFSKFFGYGGVIDSFFSQYVEQYVDTSRNRW
RFVNNVGISNRSLRQFQRAREIRNKFFEPGTQNLNVEFGMETVYLDLHISNFRFELGDTS
MTYRHGPTRVNSFKWPTNGRSDGVRLIFTPPQSGFSITKEYPGEWGLFRMFTQAKNQRAQ
TVTDKVINVDFKGNKVAMKLVPSSVSHPFWLKALESFSCPARL
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgttttacagatttattcattatcttaaagcagttttatactcaaagtgggctatcact
ttgatcggcttgctagcgttatccttcttaatctggtttggaggtccgctgattgcaatt
gctggcagtgagccgttttctagcccaatcgtaagattggtaataatcttgtgcctgaca
tttttttgggcaggtattaacatttaccaagctaaaaaagagaaaaggagcaatgaggag
aatgtaaactctttgctgaatatttcatcggaagaggaagataaagaaggtattgaccat
gagatcgatacgttacgcgcacgaattaccaaggcgatctcaatcctaaaaacatcttca
ttactgaaaggaaagagcttatatgagttgccttggtatattttaattggcccacccgga
acagggaaaacaactgccttgtacaactcaggtttggagtttccgcttaaagaccagcta
ggtgacgatccgttggctggggttggcggtaccaggcactgtgattggtggtttacaaat
aaagctattctgattgatacagcaggtcggtatacaacacagaacagcaacgctaagctc
gatagtaaagcctggctcggatttctcggtctgcttaaaaaatacaggactcaaaagccg
atcaatggtgcaattatcactatcagcctaaccagcttgatgaatgacacgcctacagaa
agaacacttcaggcgcgtgcaataaaacaacgccttcaagagttaaaaaataggctgggc
atgaatttccctgtgtatgttatttttacaaaggctgatctggtcgcggggtttaatgag
ttttttgaagggttaagccaggagcagcgtgagcaggtttttggcataacccttccagag
cagtccagcgaagatgaacaaggtgtagtttctcaattcaatcgagagtttcatcgaatt
ctagaaaacttaactcaacagattaacgaaaaagttttcaacgtagctgacaaagaaaag
cgcctgctgatttacgaatttccaaaacagctcaggatgttgcaagcagcagcggatgat
ttgttgaaaataatatttagcccgaatagctttgaagagccaccaatgttgcgtgggata
tatttagttagcgcgacacagaaaggcacacctattgacaaggttatttctgaagcaacg
catagtctcggaatgggagaagtttcgctacatcagcatggtggtcagtcgaaaggttac
tttgtcaaaaacttgttcgaacaggtgatctttccagagcaagatgctggaacattgaac
cgtatccatgaaagaaatagcctattgattcgtcgctgcgtcattggtgcaagctgtttg
cttctcgtcacttctactgtgttgtggagtttgagttaccgctggaatatgctttatgtg
gacaagactgaagaagtactggatgagttcgatctaattacaggaagtggtttatcaaaa
gatactgatattgtttccctggtaaaggctttggactatttgaaacaatcaccaaattct
atttcaaaaagtttagacggtgaggttgttgttgccaaaaacttagggttgtatcaaggt
gataagattggcgagcctcttaatgttgcctattatcgagtattgaaagaacacttttca
ccgtatattacctctgctttaattcatgatatgaatcagaagcagtcatatttggaatat
ttatatgagacattgaaaacttatttgatgttgtttgatagcagtcgatttaataaagag
caagttctgagttggtatgttcaatattatggtcgtaattacccgggtgagataaatgct
gatctcagaacgtctttgttagttcataccgatgccatgcttgaaagtggtgtgagaact
gctgactatgacgatgatagtgtaagagtggctcgtgaggccttgagtgagcttccgctc
tccgaaagagcatatcaacgtctgaagcttgactataaatcaagccatatacctgacttc
cggatcaccaatgtcattgggagcgatagtcacaatattttctaccgggaaagcgggaaa
aaattgagtgaagggatccctgggctttacacctataacggatttcacagtatctttcag
ttagaaaatcagagaatagtcaagcgtttgatggaagactcatggatttatggtgatgaa
gaaatagagctttcgaaaattactaacgacgaaattatgaaggaagttgagagtaagtat
tatcaggagtacatctttgtatgggaaaaactaatttcagatctcaggctcaaggaattt
gattcagcttcagaaggaattgacatcgttagtgtgctttctggatcggagagaccgata
cagaacatgatctatgctattcagaaacagctaaagttaagtacactgccggctggagat
gaggtgactaaagcagcgaaaattgcgactcatgctgcagacgttgcgctagaaaataaa
aagtcaagaattgaacgttatcttccggtgtcggaaagtaacgctcgtggtgatttaccg
ggagaagttgtagaagattatttttcagaaattcttgatgctacggaaagtgacttaaaa
caaataaattattcattgagtacgctggaaagtgaactgttaaatattgcgaatgttcgt
tcaggcaaagtgaatcagctaccattgataggcacaagtaataatacagagatcaatagt
gcgttcaggaaactaagggatacgttacctgaaccatttagctattggttagtagaggca
cataacaaaacaacccagctttctaaagaaggaacacaaagtcagctcaatgacatttgg
caagatcaagtttatcgagaatataaaaaagcaatccgtggaaaatatcctttatcaccg
aatgcacgtcatgaagtgaagctgaaagatttctctaagttcttcggttatggtggtgta
attgatagtttctttagtcaatatgtagaacagtacgtagatacttcgagaaacagatgg
cggtttgttaataacgttgggattagtaatagatcactacgtcaatttcagagagcaaga
gaaatccgaaacaaattttttgagccgggtacccaaaatttgaatgttgaatttggcatg
gaaactgtttatctggatctacatatcagtaacttccggtttgagctcggggacacatcg
atgacttatcgtcacggaccgacacgagtaaatagttttaaatggccgacaaatggtcga
tctgatggcgtcagattaattttcacaccaccacaatctgggttttccatcacgaaagaa
tacccgggagagtgggggttattcaggatgttcacacaagcgaagaatcagcgtgcacaa
acagttacagacaaggtgatcaatgttgactttaaaggaaataaagtcgcaatgaagctg
gtacctagtagtgtatctcatccattttggcttaaagcactggagagcttttcatgtccg
gcacggctttaa

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