Photobacterium atrarenae: NNL38_09000
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Entry
NNL38_09000 CDS
T10583
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pate Photobacterium atrarenae
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pate01002
]
NNL38_09000
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pate01011
]
NNL38_09000
Peptidases and inhibitors [BR:
pate01002
]
Cysteine peptidases
Family C82
NNL38_09000
Peptidoglycan biosynthesis and degradation proteins [BR:
pate01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NNL38_09000
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Bcr-Abl_Oligo
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UTV26514
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All DBs
Position
1:complement(1884219..1885880)
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AA seq
553 aa
AA seq
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MFEVSRTLHVVLKLSVISFLAAAVALSSDTVQAKAQLGWEPLANYQPVSQQDLCPHRSEK
VCLPQQLEQIYAANHYYPIWTESPQRDEFLLQLKSLAYAELVPGLAVRITELERLKQETD
QRAFDIVATDTFLLYKSAIEKIQANPSGLFVQAEFPLTTQPENILTSLKLPLDLAAELEQ
LRPNVMRLERAVAMAETFRTLAPHGLRLPLRGVVKQHQVIPNGHQLLEVLMQFGDLSQLD
YQLLDDQPIITNSGEVHHAIQAFQRRNGLLDDGIIGPATVRQLVLPYAEVARVIALNIQR
SRFGIQETERPRIQVNIPDYMLRVTQDNQLVFESKVIVGRSSRPTYLFSSSLNTMVVNPY
WNVPTTIKQEDVIPKVKVSPSYLAERNMRIVRSWRDRSEISPSQIEWSAVEPETFPYEFQ
QGPGPRNALGRVKFLMPNDYSVFLHDTPARGLFRQHKRSFSSGCVRVEKADELAEFLLEY
QARPGIPPYRAMVRDEGQDTISLAKRVDVDFTYVTAWLDEHQQLQMREDIYGYDRPGTEP
VEPQYITLKDFSY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagtaagccgtaccttgcatgttgtgttaaaactcagtgtgatttcgtttctt
gcggccgctgtggcgttgtcttccgatacggtacaggccaaagcgcagttgggctgggag
ccgctggcaaattatcagccggtcagccaacaggatttatgtccgcatcgctcagagaaa
gtttgtttgccccagcagctggagcagatatatgcggcaaatcattattatccgatctgg
actgaatcaccgcagcgagatgagttcctgttgcaattaaaatctttggcttacgcagaa
cttgtgcccggattagcggtgcggattactgagcttgagcgattaaagcaggagacggat
caacgggcctttgacattgtcgcgactgatacttttctgctctataaatctgctatcgaa
aaaatacaggcgaatcccagtggattatttgtccaggcggagtttccgctgacaactcaa
ccggaaaatattttaacctcactgaagctgccactggatttggccgccgagcttgagcaa
ttgcgtccgaatgtgatgcggctggagcgcgcggtggcaatggctgaaacatttcgtacc
ttagcccctcacgggctgaggctgccgctgcgcggggttgtgaagcagcatcaggtgatc
cccaatggccatcagcttctggaggtgttgatgcagtttggcgatctcagccagctcgat
taccaactgctggacgatcagccgatcataaccaacagtggtgaagtccatcatgctatt
caggcgttccagcgtcgtaacgggttgctggatgacggtattattggcccggcaaccgta
cgccagttggtgttgccttatgcggaagtcgcacgggtgattgcactgaatatacagcgt
agccggtttggcatccaagagaccgagcgtccgaggatccaagtcaatattccggattat
atgttgcgggtgacccaggacaatcagctggtgtttgaatcgaaggtgattgtcgggcgc
agctcacggccaacgtacctgttttcttcctcgctcaataccatggtggtcaacccgtac
tggaatgtgccgacaaccatcaaacaggaagatgtgatcccgaaagtgaaagtgtcgccg
agttatctggccgaacggaatatgcggattgtccgtagctggcgtgatcgaagtgaaatt
tcaccgtctcagattgaatggagcgcggttgagccggaaaccttcccgtatgaattccag
caggggccggggccgagaaatgccctgggccgggtgaagtttctgatgcctaatgattac
tcggtgtttctgcatgataccccggctcgcggcctgttccggcagcataaacgtagcttc
agctccggttgtgtccgggttgaaaaagccgatgagctggcggagttcttactcgaatac
caggcccgcccggggatcccgccttaccgggccatggttcgtgatgaggggcaggacacg
attagcctcgcaaaacgggtggacgtggactttacctatgtcaccgcctggctcgatgag
caccaacaattgcaaatgcgtgaagatatttacggctatgaccggccggggaccgagccg
gttgagccgcagtatattacgttgaaagacttcagctactga
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