Photobacterium atrarenae: NNL38_10495
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Entry
NNL38_10495 CDS
T10583
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pate Photobacterium atrarenae
Pathway
pate03030
DNA replication
pate03430
Mismatch repair
pate03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NNL38_10495 (holB)
03430 Mismatch repair
NNL38_10495 (holB)
03440 Homologous recombination
NNL38_10495 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pate03032
]
NNL38_10495 (holB)
03400 DNA repair and recombination proteins [BR:
pate03400
]
NNL38_10495 (holB)
Enzymes [BR:
pate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NNL38_10495 (holB)
DNA replication proteins [BR:
pate03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NNL38_10495 (holB)
DNA repair and recombination proteins [BR:
pate03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NNL38_10495 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
HolB_lid
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UTV26784
UniProt:
A0ABY5GDJ9
LinkDB
All DBs
Position
1:complement(2230368..2231330)
Genome browser
AA seq
320 aa
AA seq
DB search
MLYPWQEPVWQNWQQLLRQGRLHHAILLVAPGGSGREALAKQLAKTVLCQQSETEPCGLC
HGCQLFAAGTHPDFHAVAPVQAGKQIGVDAIRQCNRWATETSQLAGQRVIMIDPADHMGE
SAANALLKTLEEPPSGCQFILLAHSLDRLLPTITSRCNQWRLPTPDESQTQRWVEQQLMQ
SVKREAIRLNSGSPLATVAFIEQGQDIRYGKLLAAFSEFAKPPHLGLYEVAGLCTAEGSI
SLKWLSYFLVDCIKLQQGAGSHLIHCESVGLVQAVAGQLSPAVLLRQVHQVNALQRQLET
HPGLNEELLIVNWLTGFMPA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatccatggcaggagcctgtttggcagaactggcagcagttgttgcgccaaggt
cgcttacaccatgccattttgctggtggcaccgggcggcagcggtcgtgaggcactggcc
aagcagttggcgaagaccgtgttgtgtcagcaaagtgagaccgagccctgcggcctctgt
catggctgtcagttgttcgcagccgggacgcatccggattttcatgccgtggccccggtt
caggctgggaaacagattggggtcgatgcgatccgccagtgtaatcgctgggccacagaa
acctcgcaattggccggtcaacgggtgatcatgattgatccggctgatcacatgggggaa
tccgcggccaatgccttgttgaaaaccctggaagagccgccgtcgggttgtcagttcata
ttactggcccactcacttgatcgcttgttgccgaccatcaccagtcggtgtaaccaatgg
cggttgccgaccccggatgagtcgcagacccagcgttgggtagagcagcagttgatgcag
agcgtcaagcgggaagctattcgcctcaatagcggctcaccgttggcaaccgtggcgttt
atcgagcaagggcaggacattcgctatggcaagttgctggcagccttcagcgaatttgcg
aagccgcctcaccttggcttgtatgaagtcgccgggttatgtacggcggaagggagtatc
agcctgaagtggctcagctacttcctggttgactgtattaaacttcagcaaggcgcaggt
tcgcacctgatccattgtgaatcagttggcttggtgcaagctgtcgcggggcaactcagt
ccggcggtgctactgcgtcaggttcatcaggtgaatgctctgcaaaggcagctggaaacg
catcccggcctgaatgaagagctattaattgttaattggttaactgggttcatgcccgct
taa
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