Photobacterium atrarenae: NNL38_12460
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Entry
NNL38_12460 CDS
T10583
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pate Photobacterium atrarenae
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pate03009
]
NNL38_12460 (der)
Ribosome biogenesis [BR:
pate03009
]
Prokaryotic type
GTPases
NNL38_12460 (der)
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
AAA_22
Roc
ATP_bind_1
Ras
PduV-EutP
AAA_24
ABC_tran
Nuc_deoxyri_tr2
nSTAND3
AAA_18
TniB
SRPRB
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
UTV27142
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All DBs
Position
1:complement(2657652..2659145)
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AA seq
497 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKAELEEHEFIVIDTGGI
DGTEDGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRDKPTFLVVNKI
DGIDADSASAEFWQLGMDAMYQIAAAQNRGVTALMERALAPFAETLKAQETEDGEIAIED
LTSVEDIEKANLSEEDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP
GTTRDSIYIPMERDDQEYVLIDTAGIRRRKNMHQAVEKFSVIQTLKAIEDANVVLMVIDA
RENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFIS
ALHGTGVGHLYESVQEAYQSATKRISTSMLTRIMQMAQDDHQPPMVRGRRVKLKYAHAGG
YNPPIIVIHGNLVHELPGSYKRYLMNYYRKSLEMMGTPIRIQFQSSENPFEGKKQKLTIS
QERQRKRLTTALKNREK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgttgttgcccttgtcgggcgcccgaatgtgggtaaatcgacgctatttaac
cgtcttacccggactagggatgcgctggttgcagactttcctggcctaaccagggatcgt
aagtacggtaaagctgagctcgaagagcacgaatttattgtgatcgataccggcggtatc
gacggcaccgaagatggtgtggaaaccaagatggccgagcagtcgctggcggcaattgaa
gaagccgatgtggtgctattcctggtcgacggccgtgccggcctgacggcggcggatgag
gcgatcgccaaacatctgcgcagccgcgataagccgaccttcctggtggtgaacaagatc
gacgggattgacgctgacagtgccagtgctgaattctggcaactgggaatggacgccatg
taccagatcgccgcagcccagaaccgcggcgtgaccgcgctgatggagcgtgccctggcg
ccgtttgccgagacgctgaaggcgcaggaaaccgaagacggcgaaatcgcgattgaagat
ctgacctcggtggaagacatcgagaaagccaacctgtcggaagaagatgctgaagcagcc
tacaagcgcctgcaggagcaaccgatcaagctggcgattatcggtcgtccgaacgttggt
aaatcaaccctgaccaaccggatcctgggtgaagagcgggtggttgtgtacgatatgccg
ggcaccacccgtgactcgatttacatcccgatggagcgtgatgatcaggagtatgtcctg
attgataccgcagggatccgtcgtcgtaagaatatgcatcaggcggtggaaaaattctcg
gtgatccagaccttgaaggcaattgaagatgccaacgtggtgctgatggtgattgatgcc
cgcgagaacatttcagatcaggacttgagcctgttgggctttgccctcaatgccggccgt
tcgctggtgattgcggtcaacaaatgggatggtctggataacgaagtgaaagagcgggtg
aaatcagagctggaccgtcgcctgggctttgtcgactttgcccggatccactttatttct
gcgctgcacggcaccggtgtcggccacctgtatgagtctgtgcaggaagcctaccagtct
gcgaccaagcggatcagcacctcgatgctgacccggattatgcagatggcgcaggacgac
caccagccgccaatggtccgcggtcgccgggtgaagctcaagtatgcgcacgccgggggg
tataacccgccgattatcgtgattcacggtaacttggttcacgagctgccgggctcctac
aagcgttacctgatgaactattaccgcaagtcgctggaaatgatggggaccccgatccgg
attcagttccagagcagcgagaacccgtttgaagggaaaaagcagaaactgacgatctcc
caggagcgtcagcgtaagcgcctgactaccgccctgaaaaaccgggaaaaataa
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