Photobacterium atrarenae: NNL38_12695
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Entry
NNL38_12695 CDS
T10583
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pate Photobacterium atrarenae
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pate03400
]
NNL38_12695
DNA repair and recombination proteins [BR:
pate03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NNL38_12695
Archaeal homologous recombinant proteins
NNL38_12695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_ATPase
ABC_tran
AAA_21
NPV_P10
MeaB
DUF87
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UTV27188
LinkDB
All DBs
Position
1:complement(2711283..2715053)
Genome browser
AA seq
1256 aa
AA seq
DB search
MKILALRGENLASLQHKFEIDFANGRLGDAGLFAITGKTGAGKSTLLDAICLALYDRIPR
LQSNKKNDAEIGRDDDAGRIKANDVRSILSRGKADGFAEVDFVANDGTHWRAHWSVRRAR
GRADGRIQASEQWLENIETGQRFAGKKQELQNEIERLIGLTFDQFRRAVMLPQGEFAAFL
KAGADERAALLERMTGGEIYGRLSVAAYERARKEKQQLEQLQAKLGDIALLSEEEKQQLS
EEVTALKEAISQLDEQINALAGHRQVLSHDALLASRVAEAREALASAQQAQTEAAPRYAQ
LSAIEQAQPAAADFSQLQHTQLQLSRLEKALAQAEQAKQHNQQVLLDSDGAVQAAKQKLT
EAQQAWQALEPKLKQAAAIDLQHRGLQQQLSDIENDTRQQAQTLAEHQQRQQDYQQQQQQ
LHQRQQRLALMLDRDRELAGVAEQYQPVLDNLDQYLSAHRTLARLSQEKQQIQLEQQRYQ
RDSAVLTQQMQALSQQRASLEEQLEGQDAAVLEQAQYDEQQRFSELQQQRDTLHQAMAGL
REWRTALQQKAKLAGELQEWQDYQHQAEQRLAVLEPELATLATQYQEAEHAYQQSLAVVN
LSEYRSQLKDDEPCPLCGALDHPYAEQHPAVEGMLHSLRQRLQTLAQQRQAGEGERQHLL
QQLPQCQQRLQVLGHEIQQFERFIAQLFDQLTTQFSHLSGLECLHQDSEHEVLEQQMQRW
QQDVELAHQELQQLQHSLELRQVQIRQVRQLQQQLQQVQQGEGELKEIQHQLEQSATQWQ
SRLASLDEQSDTQHEILDARARALNEQYGNDQWLDMLRQHGAEQYIQQLKYQVEQFLNNQ
QALQDTEKQLAALAPQLAECSTALSAIQQQLSEGQHKAGGLRQQATELWQQRQALVGESD
LERLEYSHKTAIDTAQQRLGETEAKQRQAGEALAAAESTRNSSQQQLLETQAQHREVVRR
WLDWQQKLGLNEHQLMQLLSKEERWLAEERQALKAIEQAVSAAQTLLVEREQAVADHQAQ
AEQARAWFARHELSEDAAGQAEQLDAWQQQKQAKEEQLFQHRQRLVQGEQAEQQAGALTE
ALGRQQAQTELWLKMSELIGSATGNKFRTLAQGLTLQQLVLLANEHLQDLAPRYALQPVP
GSPLALQVIDHDMGDEVRSVESLSGGESFLVSLALALALASLAADTRQLGSLFIDEGFGT
LDPDSLEMALACLDALQADGRQIGVISHVGTLVERIGVQVAVEAQGGGRSRISVKG
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagcgctacgaggcgagaatctcgccagtttacaacacaaattcgagata
gattttgccaatggccggctgggcgatgctggtctgtttgccattaccggtaaaaccggg
gccggcaaatcaaccctgctcgatgccatctgcctggcgttgtatgaccgcatcccccgc
ctgcagtcgaacaagaaaaatgatgccgaaatcggccgcgatgacgatgccgggcggatc
aaggccaatgatgtgcgcagcattctctcgcgtggtaaggccgacgggtttgctgaggtg
gactttgtggctaacgacggcacccactggcgggcgcactggtcggtgcgccgggcccgc
ggccgggcggatggccggatccaggcctcggagcagtggctggaaaatattgaaaccggg
cagcgctttgccggaaaaaaacaggaattgcagaacgagattgaaaggctgatcggcctg
acgtttgatcagttccgccgcgcagtgatgttgccgcagggggagtttgccgcttttctt
aaggccggcgccgatgaacgtgccgcgctgctggagcggatgaccggcggcgaaatctat
ggccgcttgtctgtggcagcttacgagcgggcacggaaagaaaaacagcagctcgagcag
ttgcaggccaagctgggcgatattgcgttgctgagcgaggaagaaaagcagcagctcagt
gaggaggtgacagccctcaaggaggcgatcagccagttggatgagcagatcaatgcgctg
gcgggccatcgtcaggtgctgagtcatgacgccctgctggcgagccgggtggcagaggcc
cgcgaggctctggcgagcgcgcagcaggcgcagactgaggcagcgccgcgctatgcgcag
ttgagcgctatagagcaagcccagccggcagcagctgatttttcccagttgcagcacacc
cagcttcagctttcgcggctggaaaaagcgctggcgcaggccgagcaggccaaacagcac
aaccagcaggtattgctcgacagcgatggtgcggtgcaggctgccaagcaaaaattgacg
gaggcacagcaggcgtggcaggcgctggagccgaaactaaaacaggccgcggccatcgac
ttgcagcaccgtggcttgcagcaacagctgagcgatattgagaacgacacccggcagcag
gcgcagactctggccgagcaccagcagcgccagcaggattatcagcagcaacagcaacag
ttgcatcaacgccagcagcgcctggcgctgatgctggatcgcgaccgggagctggccggg
gtggccgagcagtaccagccggtgctggataacctggaccagtacctgagtgctcaccgc
actctggcacggttgagccaggaaaagcagcaaatccaattggagcagcagcgttaccag
cgggactcggcggtgctgactcagcagatgcaggcgctgtcgcagcaaagagcttctctc
gaggagcagctcgaagggcaggacgcggcagtgctggagcaggctcagtatgatgagcag
caacgcttcagcgagctacagcaacagcgcgacaccctgcatcaggcaatggccggtctc
agggagtggcgcacggcgttgcagcagaaagccaagctggcaggggagctgcaagagtgg
caggactatcagcaccaggccgagcagcggttggcggttctggagccggagctggcgaca
ctggcgacgcaataccaggaagcggagcatgcttatcagcagagtctggcggtggtgaat
ctgagcgaataccgcagccagctcaaggacgatgagccttgcccattgtgcggcgcgctg
gatcatccttatgccgagcagcacccggcggtggaagggatgctgcactcgttgcgccag
cggttgcagaccctggcccagcagcgacaggcgggggaaggagagcgtcagcacttgttg
caacagttgccgcagtgccagcagcgtctgcaggtgctcggtcatgagatacagcaattt
gagcgctttattgcgcagctgttcgatcaactgaccactcagttcagccacttatcaggt
ttggagtgcctgcaccaagacagcgagcacgaggtgctggagcagcagatgcagcgctgg
cagcaggatgttgaactggcccaccaggagctgcaacagttgcagcacagcctggagctg
cgccaggttcagatccgccaggtacgtcaactgcaacagcagttacagcaggtgcagcag
ggcgagggcgagctgaaggaaattcagcatcagctggagcagagcgccacccagtggcag
agccgtctcgcgtcgctggatgagcagagcgacacccagcatgagatcctggatgcccgc
gccagggcgctgaatgaacagtacggcaatgatcagtggctggacatgctgcgccagcac
ggtgccgaacaatatatccagcagctgaaatatcaggttgagcagttcctgaacaaccag
caggcattgcaagacaccgagaagcaactggcagcgctggcgccgcaactggcggaatgc
agtacagccctgagtgcgatacaacagcagctgagcgagggacagcacaaggcgggaggg
ctgcgccagcaggccaccgagttgtggcagcagcggcaggcgctggtaggggagtccgat
cttgagcggcttgagtacagtcataaaacggcgattgataccgcgcagcaacgtctgggc
gagactgaggcgaaacagcgccaggccggtgaagcgctggcggccgcggagtcgacccga
aacagcagtcagcagcagctcctggagacccaggcccagcatcgcgaagtcgttcggcgc
tggctcgactggcagcagaaactggggctcaatgagcaccagttgatgcaattgctgagc
aaagaagagcgctggctggccgaggagcgtcaggcgctcaaagcgattgagcaggcggtc
tctgcggcgcagaccttgctggttgagcgagagcaggcggtggcggatcaccaggcgcag
gccgagcaggcccgggcctggtttgcccgccatgagctcagcgaggatgccgccgggcag
gccgagcagctggacgcgtggcagcaacaaaagcaggcgaaggaggagcagttgttccag
caccggcagcgattggtccagggcgagcaggcggagcagcaggccggggcgctgaccgag
gcgctgggtcgccagcaggcgcaaacggagttgtggctgaaaatgagcgaattgattggc
tcggcgaccggcaataagttccgcaccctggcccaggggctgactttgcagcaactggtg
ctgctggccaatgagcacctgcaggatctggcaccgcgctatgccctgcaaccggtgccg
ggtagtccgctggcactgcaggtgatcgaccatgatatgggtgatgaggtgcgcagtgtg
gagtcgctctccggcggtgaaagcttcctggtgtcgctggccttggcgctggcgctggcc
tctctggctgccgatactcgccagctgggctcgctgtttatcgatgagggattcggcacc
ctggatccggatagcctggagatggcgctggcttgtctggatgccctgcaggctgatggc
cgccagattggggtgatctcacatgtcggaaccctggtggagcgcatcggggtacaggtc
gccgttgaggctcaggggggcggtcgtagccggatttcagtcaaagggtaa
DBGET
integrated database retrieval system
