Photobacterium atrarenae: NNL38_13165
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Entry
NNL38_13165 CDS
T10583
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pate Photobacterium atrarenae
Pathway
pate00220
Arginine biosynthesis
pate00240
Pyrimidine metabolism
pate00250
Alanine, aspartate and glutamate metabolism
pate01100
Metabolic pathways
pate01110
Biosynthesis of secondary metabolites
pate01240
Biosynthesis of cofactors
Module
pate_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NNL38_13165 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NNL38_13165 (carB)
00220 Arginine biosynthesis
NNL38_13165 (carB)
Enzymes [BR:
pate01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NNL38_13165 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
Epimerase
Motif
Other DBs
NCBI-ProteinID:
UTV27267
UniProt:
A0ABY5GF85
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Position
1:complement(2816061..2819285)
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AA seq
1074 aa
AA seq
DB search
MPKRTDIQSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALDLERHGVLAEFGVEMIGATA
DAIDKAEDRSRFDAAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAIGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVQLENAVKEGG
FAGLNADVLRKLKRKGFADARLAKILGVAESEIRKLRDQFDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEQPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVERLGLKQPENATVTALEQAVEKSKEIGFPLVVRPSYVLG
GRAMEIVYDEADLRRYFAEAVSVSNESPVLLDRFLDDATEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVEKLAFELGVRGLMNTQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQTLESQGFTQEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAFAKAELGCGKEKQAKGRALLSVRGNDKQRVVDLA
SKLVKQGYELDATHGTAVVLGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAEGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMAWAADDRNKVVSVQELHARVNQA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagtgttcttatcctgggtgccggcccgatcgtgatc
ggccaggcgtgtgagtttgactactcgggtgcccaagcctgtaaagcgctgcgcgaagaa
ggctaccgcgtcattctagtgaactcgaatccggcaaccattatgaccgacccggaaatg
gccgatgcgacttacatcgagccgatccactgggaagtggtgcgcaaaatcatcgagaaa
gagcgcccggatgccgtgctgccgaccatgggtggccagacagccctgaactgcgcgctg
gatctggagcgccacggggtgctggcagagtttggggtcgagatgattggtgcgactgcc
gatgcgattgataaagcagaagatcgttcgcgtttcgatgcggcgatgaagtcgattggc
cttgagtgtccgcgcgccgataccgccaaaagcatggaagaagcctataaagtcctcgat
atggttggctttccatgtattatccgtccgtctttcaccatgggcggcaccggtggcggg
attgcctataacaaggaagagtttgaagaaatttgccgccgcggcctggatctgtcgcca
accaatgagctgctgattgatgagtcgctgattggctggaaagagtacgagatggaagtg
gttcgggataagaacgacaactgcatcatcgtatgtgcgattgaaaactttgacccgatg
ggaatccacaccggtgactcgatcaccgtggcgccagcccagaccctgaccgacaaagaa
taccagctgatgcgaaatgcttcgctggctgtcctgcgtgaaatcggcgttgaaaccggt
ggctcgaatgttcagttcgggatcaatccgaaagacggccgcatggtgatcatcgagatg
aacccacgggtttcgcgctcttcagccctggcctcgaaagcaaccggtttcccgattgcc
aaagttgcggccaagctggcgatcggctttaccctcgatgagctgatgaatgacatcact
ggcggtgcaacgccagcatcattcgagccgacgattgactacgtcgtgactaagatccca
cgcttcaacttcgagaaatttgccggtgccaacgatcgtctgacgacgcagatgaaatcg
gtcggtgaggtcatggcgattggccgtaaccagcaggaatcgttgcaaaaagccctgcgt
ggcctggaagttggcgcgaccggctttgacgaaatggttgacctggatgcgccggatgcg
ctgaccaagatccgccatgagctcaaagatgccggtgccgagcggatctggtacatcgct
gatgccttccgggccggcttgtcagtcgatggggtctttaacttgactaatatcgaccgc
tggttcctggtccagattgaagagctggtgcagcttgagaacgccgtgaaagaaggcggc
tttgccggcctgaatgcggatgtgctgcgcaagcttaagcgtaaaggttttgctgatgca
cgtctggcgaaaattctgggcgtggccgaatctgaaatccgtaaactgcgtgatcagttc
gacattcacccggtctacaagcgtgttgatacctgtgccgcagagttttcttcagatacc
gcttacatgtactcatcatacgatgaagagtgtgaagcgcagccgactgacaaagacaag
atcatggtattgggtggtggtccgaaccggattggtcagggcattgagtttgactattgc
tgtgtacatgcgtcactggcgctgcgtgaagacggttacgagaccattatggtgaactgt
aacccggagactgtctcgacggactacgacacctcggatcgtctgtactttgagccggtg
acactggaagatgtgctgtctatcgtccgcgttgaacagccaaaaggcgtgattgtgcag
tacggtggccagacaccactgaaactggcgcgtgctctggaagcggcgggtgtgccgatt
atcggcaccagcccggatgcgattgaccgtgccgaagaccgtgagcgattccaggcggct
gttgagcgtctgggcttgaagcagccagagaacgccaccgtaacagcgttggagcaagcg
gttgagaaatcaaaagaaattggtttcccgctggtggtgcgcccatcttacgtcctgggt
ggccgggcgatggaaatcgtttatgacgaagccgacttgcgccgttactttgcagaagcg
gtgagcgtctcgaacgaatctccggtgctgctggatcgcttcctggatgacgcaaccgaa
gtggatatcgacgcgatttgtgacggtgagcgcgtggtgattggcgggatcatggaacac
attgagcaagccggtgttcactccggtgactcggcctgttcgctgccggcttacaccctg
agccaagagattcaggacgtgatgcgtcagcaggttgagaagctggcctttgagctgggc
gttcgcggcctgatgaacactcagtttgcggtgaaagataacgaagtgtacctgattgag
gtcaacccacgtgctgcgcggacggtcccattcgtctcgaaagccacgggcgcaccgctg
gctaagattgcggcgcgtgtaatggcaggccagacgctggaatctcagggctttacccaa
gagatcatcccaccatactactcggtgaaagaagtggtattgccgttcaacaagttcccg
ggagtagacccgctgttgggccctgaaatgcgctcgaccggtgaggttatgggcgttggc
gacacgtttgccgaggcttttgccaaagccgagctgggttgtgggaaagagaagcaggcc
aagggccgtgcgctgctgtcggtgcgtggcaacgataagcaacgtgtggttgacctggct
tcgaagctggtgaagcagggttacgagctggacgcgacgcatggcacggcagtggtgctg
ggtgaagccgggatcaatccgcgtctggtgaacaaggttcatgaagggcgtccgcatatc
ctcgaccggatcaagaacaacgagtacacctacatcgtcaacacggcggaaggtcgtcag
gcgattgaggactcgaaggtcctgcgtcgcggcgcgttggcggagaaggtgaactacacc
actacgctgaatgcagcgttcgcaacctgtatggcctgggctgcggatgaccgtaacaag
gtcgtctcggtacaggagttgcatgctcgggttaaccaagcctga
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