Photobacterium atrarenae: NNL38_13345
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Entry
NNL38_13345 CDS
T10583
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pate Photobacterium atrarenae
Brite
Enzymes [BR:
pate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NNL38_13345 (srmB)
Ribosome biogenesis [BR:
pate03009
]
Prokaryotic type
rRNA helicases
NNL38_13345 (srmB)
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NCBI-ProteinID:
UTV29332
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Position
1:2857755..2858981
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AA seq
408 aa
AA seq
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MRDFSELELDSELLRAIEKIGYDRPTVIQAQAIPHAMDGRDVLASAPTGTGKTAAFLLPM
IQHLQDFPRKKPGPARVLVLTPTRELAIQVADQARALAQYTDLKIFTITGGISYDEHAEL
LGKTQDIVVATPGRLMEYIEAERFDCRAIECLILDEADRMLDMGFGKAVERIHNECRWRR
QSLLFSATLEGKGVRDFSRTILNEPVEVNAEPPRRERKKIHQIYHRCDQMEHKLALLEHI
LKHQAERTIIFVKTRERLATLRDQLAAMKIPCCWIQGEMAQASRNNAITRFRDGTVNVLI
ATDVAARGIDLPDVSHVINFDMPRTADIYLHRIGRTARAGKKGTAISLIEAHDQEMIERV
GRYMKEEVPERFIDGMRPQHKKPSTVKKKSKKKVAKKTAAGKKKKAKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgagagacttttccgaattagagttagatagcgagctgttacgcgcgattgaaaaaatc
ggctacgatcgcccgaccgttattcaggcccaggcgatccctcatgccatggacggtcga
gatgtactggcttccgctccgaccggcaccggaaagacggccgcttttctgctgccgatg
atccagcacctgcaggatttcccgcgcaagaaacccggaccggcccgcgtcctggtactg
accccgacccgcgaactggccatccaggtcgccgatcaggcccgtgccctggctcagtat
accgacctgaaaattttcaccatcaccggcggtatttcctacgacgagcacgccgagctg
ctaggcaaaacccaggatatcgtggttgccacgccgggccgcctgatggagtacattgaa
gccgaacgtttcgactgccgggcgatcgaatgcctgatcctcgacgaagctgaccggatg
ctggacatgggctttggcaaagcggtcgagcggatccacaacgaatgccgctggcgccgc
cagagcctgctgttctcggccaccctggaaggcaaaggggtccgtgatttctcccgcacc
atcctgaacgagccggtggaggtcaatgccgagccgccacggcgtgagcgcaagaaaatc
caccaaatctaccaccgctgcgatcagatggaacacaagctggccttgctggagcatatc
ctcaagcaccaggctgagcgtaccattatctttgtcaaaacccgtgagcgtctggcaacc
ctgcgcgaccagctagcggcgatgaagatcccgtgctgctggatccagggcgaaatggcc
caggcatcgcgcaacaacgccatcacccgcttccgtgatggaacggtcaacgtgctgatt
gccaccgatgtcgccgcccgcgggattgacctgccggacgtcagccacgtgatcaacttc
gatatgccacgcacggccgatatctacctgcaccggatcggccggactgcccgtgccggc
aagaaaggcacggcgatttccctgatcgaagcccacgatcaggaaatgattgagcgcgtc
ggccgttacatgaaagaggaagtaccggagcgcttcatcgacggcatgcgcccgcagcat
aaaaagccatcaacggtgaaaaagaagagcaagaaaaaagtcgccaagaaaacagcggcg
ggaaaaaagaagaaagctaaaaagtaa
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