Photobacterium atrarenae: NNL38_13370
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Entry
NNL38_13370 CDS
T10583
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pate Photobacterium atrarenae
Pathway
pate03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NNL38_13370 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pate03400
]
NNL38_13370 (ung)
Enzymes [BR:
pate01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NNL38_13370 (ung)
DNA repair and recombination proteins [BR:
pate03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NNL38_13370 (ung)
Prokaryotic type
NNL38_13370 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UTV27306
LinkDB
All DBs
Position
1:complement(2862941..2863609)
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AA seq
222 aa
AA seq
DB search
MMSWQDIITREQAQPYFQQLTQFIAAERAAGKAIYPPEPEVYHAFALTPFTQVKVVILGQ
DPYHGPDQAHGLSFSVKPGIKPPPSLANMYKELATDIPGFEIPRHGCLSPWAEQGVLLLN
TVLTVEQGKAHSHAKMGWETFTDRIIEAIDQQLEGVVFLLWGSHAQKKGKKINRDKHHVL
TSAHPSPLSAYRGFFGCQHFSKTNGLLRQMNKTEIQWALADH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctggcaggacattattacccgggagcaagcgcagccctattttcagcagctg
acacaatttattgcggctgaaagggcggccggaaaagccatttacccgcctgagccggag
gtctatcacgcctttgccttaacacctttcacccaggtcaaagtggtgatcctggggcag
gatccgtatcacggcccggatcaggcgcacgggctgagtttttccgtcaagcccggtatc
aagccgccgccgtcgctggccaacatgtataaggagctggcgactgatattccgggattt
gaaatcccgcgtcacggctgcctgagcccctgggctgagcagggcgtactgctgttgaac
actgtgctgacggtggagcagggcaaagcccactctcatgccaagatggggtgggaaacc
tttactgaccggatcattgaagcgatcgatcagcagcttgagggggtggtttttctgctg
tggggcagccatgcccagaaaaaaggcaagaaaattaatcgcgataagcatcatgtgctg
acctcggcgcacccatccccgctgtcggcttatcgcggtttcttcggctgccagcatttt
tccaagaccaacggcctgttgcggcagatgaacaaaacagagatccagtgggcactggcg
gatcactga
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