Photobacterium atrarenae: NNL38_14040
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Entry
NNL38_14040 CDS
T10583
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pate Photobacterium atrarenae
Pathway
pate00061
Fatty acid biosynthesis
pate00071
Fatty acid degradation
pate01100
Metabolic pathways
pate01212
Fatty acid metabolism
pate02024
Quorum sensing
pate04146
Peroxisome
Module
pate_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NNL38_14040
00071 Fatty acid degradation
NNL38_14040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NNL38_14040
09145 Cellular community - prokaryotes
02024 Quorum sensing
NNL38_14040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pate01004
]
NNL38_14040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pate04147
]
NNL38_14040
Enzymes [BR:
pate01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NNL38_14040
Lipid biosynthesis proteins [BR:
pate01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NNL38_14040
Exosome [BR:
pate04147
]
Exosomal proteins
Exosomal proteins of breast milk
NNL38_14040
Exosomal proteins of breast cancer cells
NNL38_14040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UTV27423
LinkDB
All DBs
Position
1:complement(3039349..3041172)
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AA seq
607 aa
AA seq
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MAKLDFHIVNRIRAQVARLGDRAALRHQAAGQWLDISWREFGAQIHQLALALAGQGLKVQ
DKVAIFSNNMPRWTIADFATLYNRCVTVPIYPTNTPQQAAYILNDADVRVLFVGEQAQHD
AALALADDCPQLERIVVMDESVVLADHPLVCHYRDFIDTYAPQADVAVLARRLDEIRMDD
LLTLIYTSGTTGTPKGVMLDYANVASQIESHDQKLALDEGDTSLCFLPLSHVFERAWTFY
VLHRGGINCYLSDTNQLKTALPAVKPNVMAAVPRVYEKIYSAVHDKVSRAPLHRKVMFTW
AVNMGARMALARQECRPPSWLLQKSYNLADKLVLSKLRDLLGGNIKFMPCGGAKLDESIG
RFFHAIGINVKLGYGMTETTATVSCWDDQCFNPDSIGMPMPGAEVKIGENNEILVRGPMV
MRGYYNMPEETAKNFTADGFLKTGDAGHFDEHGNLFITDRIKELMKTSGGKYIAPQVIEG
AIGKDHFIEQIAVIADTRKFVSALIVPCFETLEAHARELNIKYQDRLELIKHTQIIELIE
KRVVELQKDLARFEQVKKFTLLPKAFSMDQGELTPTQKLRRKVIQDRYHQQIEEMYEESH
KRSPRPH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacttgattttcatatcgtcaatcgaattcgtgcccaggttgcccggctgggc
gatcgggctgccttgcggcatcaggccgccggccaatggctggatatcagctggcgcgaa
ttcggggcgcagatccaccaactggcactggcgctggccggtcagggactaaaggttcag
gacaaggtcgcgatcttttccaacaacatgccgcgctggaccatcgctgatttcgccacc
ctgtataaccgttgtgtcacggtgccgatttacccgaccaacaccccgcagcaggcggct
tacatcctcaatgatgccgatgtccgggtgttgtttgtcggcgagcaggcgcagcatgat
gcagcgctggcactggccgacgactgcccgcagctcgagcgcatcgtggtgatggacgag
agcgtggtgctggctgatcacccgctggtgtgccattaccgcgactttatcgacacttat
gcgccgcaggcggatgtggcggtgctggcccggcgtctggacgagatccggatggacgat
ctgctgaccctgatctatacctcgggcaccacagggacgccgaaaggggtgatgctcgat
tatgccaacgtagcctcgcagatcgagtcccatgatcagaagctggccctggatgaaggg
gatacctcgttgtgctttttgccgctctcgcacgtgttcgagcgcgcctggaccttttat
gtcctgcaccggggcggcatcaactgctacctgtcggataccaatcagctcaaaacggcc
ttgccggcggtgaagccgaatgtgatggctgccgtgccgcgggtatatgagaaaatttac
tctgcggtccacgacaaggtctcccgggcgccgctgcaccggaaggtaatgtttacctgg
gcggtcaatatgggcgcgcggatggcgctggcgcgtcaggagtgtcgcccgccgtcctgg
ctgctgcaaaagagttacaacctggccgacaagctggtgctgagcaagctgcgggatctg
ctgggcgggaacattaagtttatgccatgtggcggcgccaagctggatgaaagtattggc
cgtttcttccatgctatcgggatcaacgtcaagctggggtacgggatgaccgaaaccacg
gccacggtgtcctgctgggacgatcagtgctttaaccccgattcgatcgggatgccgatg
ccgggtgcggaagtgaagatcggcgagaataacgagatcctggtgcgcgggccgatggtg
atgcgcggctactacaatatgccggaagaaacggccaaaaactttactgcagatggcttc
cttaaaaccggtgatgccggtcacttcgacgagcatggtaacctgttcattaccgatcgg
atcaaggagctgatgaagacctcgggcgggaaatatatcgccccgcaggtcatcgaagga
gcgattggtaaagatcacttcattgagcagatcgcggtgatcgccgatacccgcaagttt
gtctcggcgctgatcgtaccgtgtttcgaaaccctggaagcccacgcccgcgaactcaat
attaagtatcaggaccggctggagctgatcaagcacacccagatcattgagctgattgaa
aagcgggtggttgagttgcaaaaagatctggctcgctttgagcaggtgaagaaatttacc
ctgctaccgaaggccttttcgatggatcagggcgagttgaccccgacccagaagttgcgg
cggaaagtgatccaggatcgctaccatcagcaaattgaggaaatgtacgaagagagccat
aagcgctcgccgcgtccgcattaa
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