Photobacterium atrarenae: NNL38_14840
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Entry
NNL38_14840 CDS
T10583
Symbol
frdA
Name
(GenBank) fumarate reductase (quinol) flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pate Photobacterium atrarenae
Pathway
pate00020
Citrate cycle (TCA cycle)
pate00190
Oxidative phosphorylation
pate00620
Pyruvate metabolism
pate00650
Butanoate metabolism
pate00720
Other carbon fixation pathways
pate01100
Metabolic pathways
pate01110
Biosynthesis of secondary metabolites
pate01120
Microbial metabolism in diverse environments
pate01200
Carbon metabolism
pate02020
Two-component system
Module
pate_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pate_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pate_M00150
Fumarate reductase, prokaryotes
pate_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NNL38_14840 (frdA)
00620 Pyruvate metabolism
NNL38_14840 (frdA)
00650 Butanoate metabolism
NNL38_14840 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NNL38_14840 (frdA)
00720 Other carbon fixation pathways
NNL38_14840 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NNL38_14840 (frdA)
Enzymes [BR:
pate01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NNL38_14840 (frdA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
Thi4
DAO
Lycopene_cycl
NleF_casp_inhib
Motif
Other DBs
NCBI-ProteinID:
UTV27554
LinkDB
All DBs
Position
1:3190656..3192461
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AA seq
601 aa
AA seq
DB search
MKTITTDIAVIGAGGAGLRAAIAAAEANPELDIALISKVYPMRSHTVAAEGGSAAVIKDE
DSLDNHFNDTVGGGDWLCEQDVVEYFVENATREMTQLEQWGCPWSRKDNGDVNVRRFGGM
KVERTWFAADKTGFHMLHTLFQTSIKYKQIQRFDEYFVVDLLVDDGQAQGLIAIHMSEGE
LICIKAKSVILATGGAGRVYHCNTNGGIVTGDGMAMAYRHGVPLRDMEFVQYHPTGLPGT
GILMTEGCRGEGGIIVNKNGYRYLQDYGMGPETPIGQPKNKYMELGPRDKVSQAFWHEQQ
KGNTIEHPLGDVVHLDLRHLGEEYLRERLPFICELAKAYVNVDPVKEPIPIRPTVHYTMG
GIETNSRNETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEEAVARAAEFNG
WNDAAIDAQIREVQARIDTLMNQEGDENWADIRTEMGQSMEAGCGIYRQEDLMQATIDKL
AELRERYKRISIKDKGKVFNTDLLYAIEIGYSLEVAEAMAHSALLRRESRGAHQRLDEGC
TERDDDNFLKHTLAFYNGDQAPKIEYSEVTITKSQPKARLYGAAAEEAAAKEAAEQKKEQ
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgaagacaattaccacagatatcgctgtaatcggtgctggtggtgccggcctacgcgcg
gccatcgcagcagcagaagccaacccagagctggacattgctctgatctctaaggtctac
ccaatgcgctcccatacggtcgcagcggaagggggctctgccgccgtcatcaaggatgag
gacagcctggataaccacttcaatgacaccgtcggcggcggtgactggctgtgcgagcag
gacgtggtcgagtatttcgtcgaaaatgccacccgtgaaatgacccagctcgagcaatgg
ggctgcccgtggagccggaaagacaacggcgacgtcaacgtccgtcgcttcggcgggatg
aaagtcgagcggacctggtttgcggctgacaaaaccggcttccatatgctgcacaccctg
ttccagacctcgatcaaatacaaacagatccagcgctttgacgagtactttgtggtcgac
ctgttagtggatgatggccaggcgcaaggtctgattgcaatccacatgtccgaaggtgag
ctgatctgcattaaagccaagtcggtgatcctggcgaccggcggcgccggccgggtgtat
cactgcaacaccaacggcgggattgtcaccggcgacggcatggccatggcctatcgccac
ggcgttccgctgcgtgatatggaattcgtgcagtatcacccgaccggcctgccgggcact
gggatcctgatgaccgaagggtgtcgcggcgaaggcggcattatcgtcaacaaaaacggc
taccgttacctgcaagactacggcatgggcccggaaacgccgattggccagccgaaaaac
aaatacatggagctggggccgcgggataaagtctcccaggcgttctggcatgaacagcaa
aaaggcaacaccatcgagcacccgctgggcgatgtggtccatcttgatctgcgccacctg
ggcgaagagtacctgcgcgagcgcctgccgtttatctgcgagctggccaaggcctacgtc
aatgtcgacccggtaaaagagccgatcccgatccgcccgaccgtgcactacaccatgggc
gggattgaaaccaacagccgcaacgaaacccggatcaaaggcctgttcgcggtcggcgaa
tgttcctctgtcggcctgcatggtgccaaccgcctcggttcgaactccctggcagaattg
gtcgtcttcggccgggttgctggtgaagaagctgtcgcgcgtgctgccgagttcaacggc
tggaacgacgctgccatcgacgcccaaatccgtgaagttcaggcacgcatcgacaccctg
atgaatcaggaaggcgatgaaaactgggctgatatccgcaccgaaatgggtcagagcatg
gaagcgggctgtgggatctaccgtcaggaagatctgatgcaggccaccatcgacaaactg
gccgagctgcgtgagcgctacaagcgcatcagcatcaaggacaaaggcaaggtcttcaat
accgatctgctgtacgccatcgagatcggctacagcctggaagtggccgaagccatggcg
cactcagccctgcttcgccgcgagtcccgcggtgcccaccaacgcttggatgaaggctgc
accgagcgggatgacgacaacttcctgaagcatacgctggccttctacaacggcgatcag
gcaccgaagattgagtacagtgaagtcaccattaccaaatctcagccgaaagcccgactg
tatggtgccgccgccgaagaggccgccgccaaagaagccgcagagcagaagaaggagcag
gcctaa
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