Photobacterium atrarenae: NNL38_14880
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Entry
NNL38_14880 CDS
T10583
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pate Photobacterium atrarenae
Pathway
pate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NNL38_14880 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pate03019
]
NNL38_14880 (groL)
03110 Chaperones and folding catalysts [BR:
pate03110
]
NNL38_14880 (groL)
03029 Mitochondrial biogenesis [BR:
pate03029
]
NNL38_14880 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pate04147
]
NNL38_14880 (groL)
Enzymes [BR:
pate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NNL38_14880 (groL)
Messenger RNA biogenesis [BR:
pate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NNL38_14880 (groL)
Chaperones and folding catalysts [BR:
pate03110
]
Heat shock proteins
HSP60 / Chaperonin
NNL38_14880 (groL)
Mitochondrial biogenesis [BR:
pate03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NNL38_14880 (groL)
Exosome [BR:
pate04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NNL38_14880 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NNL38_14880 (groL)
Exosomal proteins of breast cancer cells
NNL38_14880 (groL)
Exosomal proteins of colorectal cancer cells
NNL38_14880 (groL)
Exosomal proteins of bladder cancer cells
NNL38_14880 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UTV27562
LinkDB
All DBs
Position
1:complement(3198549..3200198)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCEDTKAIAQVGTISANADETVGNIIAEAMEKVGRDGVITVEEG
QALHDELDVVEGMQFDRGYLSPYFINNQEAGSVDLENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTAGTV
ISEEIGLELEKVQLEDLGQAKRVTITKENTTIIDGMGEEAMIEGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKVAGLEGANEEQNVGIRVALRAMEAPIRQITKNAGDEESVVANNVRAGEGNYGYNA
ATGEYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQDSSAPAMPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggtaacgacgctcgcgtaaaaatgctggaaggtgtc
aacgttctggctgatgctgtaaaagtcacgctgggcccgaaaggccgtaacgtggtgctg
gacaagtcgttcggcgcgccaaccatcaccaaagatggtgtttctgttgcccgtgaaatc
gagctggaagacaagttccagaacatgggtgcacaaatggtgaaagaagttgcttctcaa
gccaacgatgcggccggtgacggtaccaccacagcgacggttctggcgcagtcgattgtc
aacgaaggtctgaaagcggttgctgccggcatgaacccaatggatctgaagcgcggtatc
gacaaagcggttgctgctgcggttgaagagctgaaagcactgtctgttccttgtgaagac
accaaagccattgctcaggtaggtaccatctctgcgaatgctgacgagactgtgggcaac
atcatcgcagaagcgatggaaaaagtgggccgcgatggcgtgatcaccgttgaggaaggc
caggcgctgcacgatgagctggacgtggttgaaggcatgcagttcgaccgtggctacctg
tcgccatacttcatcaacaaccaggaagcgggctcagttgatctggaaaacccattcatc
ctgctggttgacaagaaaatatcaaacatccgtgaactgctgccaacactggaagcggtt
gcgaaagcctcccgtccgctgctgatcatcgcagaagacgtggaaggtgaagcgctggca
acgctggttgtgaacaatatgcgcggtatcgtgaaagtggcggctgtgaaggcacctggt
ttcggtgaccgtcgtaaagcgatgttgcaggatatcgcggtgctgacagccggtacggtg
atttctgaagagatcggtctggagctggaaaaagttcagctggaagatctgggtcaggcg
aagcgtgtcacaatcaccaaagaaaacaccaccatcattgatggtatgggtgaagaagcg
atgattgaaggtcgcgtagcgcaaatccgccagcaaatcgaagaagcaacttcagactac
gataaagaaaaactgcaggagcgcgttgcgaaactggcagggggtgttgcggtcatcaaa
gtgggcgcggcaactgaagttgaaatgaaagagaagaaagaccgtgtagaagatgccctg
cacgcgacccgtgctgcggttgaagaaggcgtggttgccggaggtggtgttgccctgatc
cgcgcagcctcaaaagtcgctggccttgaaggtgcgaacgaagagcaaaacgtgggtatt
cgtgttgcactgcgtgccatggaggcgccgattcgtcaaatcaccaagaatgccggtgat
gaagagtctgtggttgcgaacaacgtgcgtgctggcgaaggtaactacggttacaatgct
gcgaccggtgagtacggcgacatgattgaaatgggcatcctggacccaacgaaagtcacg
cgttctgcactgcagtttgctgcttctgttgccggcctgatgatcaccacagaagctatg
gtgacggacctgccacaagactcatctgcaccagcaatgcctgatatgggcggcatgggc
ggtatgggtggcatgggcggcatgatgtaa
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