Photobacterium atrarenae: NNL38_15490
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Entry
NNL38_15490 CDS
T10583
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pate Photobacterium atrarenae
Pathway
pate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NNL38_15490 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pate03019
]
NNL38_15490 (recQ)
03400 DNA repair and recombination proteins [BR:
pate03400
]
NNL38_15490 (recQ)
Enzymes [BR:
pate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NNL38_15490 (recQ)
Messenger RNA biogenesis [BR:
pate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NNL38_15490 (recQ)
DNA repair and recombination proteins [BR:
pate03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NNL38_15490 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UTV27663
LinkDB
All DBs
Position
1:complement(3334136..3335983)
Genome browser
AA seq
615 aa
AA seq
DB search
MSSSSAAVCQPASLSASEQILRDVFGYQAFRTGQQDVIESASGGQDCLVIMPTGGGKSLC
YQIPALIRDGLTLVISPLISLMKDQVDQLQANGVAAACINSTLSREAIQDTFRQMQAGEI
KLVYVSPERALSRDFLERLPELPLSLLAVDEAHCISQWGHDFRPEYASLGALKQYVPDLP
IMALTATADETTRQDILSRLALSEPHVYLGSFDRPNIRYTLQEKYKPMSQLIRYLGTMRG
QCGIVYCNSRKRVEQITEKLCESGIRAAAYHAGMAHDERAQVQESFQRDDIHIVVATVAF
GMGINKPNVRFVVHYDIPRNIESYYQETGRAGRDGLPAEAVMLYDPSDLAWLRRCLDEKA
DGAQKQVESHKLNAMGAFAEAQTCRRQVLLNYFGEYREEPCGNCDICLDPPKRFAALEVA
QKALSCVYRVNQRFGVNHVVDVLRGMQNQRIRELGHDKLTTYGIGREHSHEFWVSILRQL
IHRGYLIQSIVHSSTLQLTEKARAILRAEVALELAVPRLDIATRSAKSDKLANRHYDKKL
FAKLRKLRKAIADEEDLPPYVVFNDASLMEMAEILPTSSGELLAVNGVGHRKLEKYGEAF
LTLIEEHLTIGDETY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccagcagcgccgccgtttgccagccagcatcgctttccgccagtgagcagatc
ctccgggatgtgttcggctatcaggcttttcgtaccgggcagcaggacgtgatcgagtcg
gcgtccgggggacaggattgtttggtgatcatgccgaccgggggcgggaagtcgttgtgt
tatcaaatcccggccctgatccgcgacgggctgacgctggtgatttcgccgctgatctcg
ctgatgaaagatcaggtcgaccagctccaggccaacggggtcgcggctgcgtgtatcaat
tccaccctgtcgcgcgaggcgatccaggacactttccgccagatgcaggccggggaaatc
aagctggtgtatgtctcgccggagcgggcgctgagccgggatttcctcgaacgtctgccc
gagttgccgctcagcttgctggcggtggatgaggcgcactgtatttcccagtggggacat
gatttccgtccggaatatgcgtcgctgggggcactcaagcagtatgtcccggacctgccg
atcatggccctgaccgcgacggccgatgaaaccacccgccaggatattctctcccggctg
gccctgagcgagccgcatgtctatctcggcagtttcgaccggcccaatatccgctatacc
ctgcaggaaaaatacaagccgatgtcgcagctgatccgctatctgggaacgatgcgcggc
cagtgcgggatcgtatactgtaacagccgcaagcgggtggagcagatcaccgagaaactg
tgcgagagcgggatccgggccgcggcctatcatgccggcatggcccatgacgagcgggcc
caggtccaggaaagttttcagcgcgatgatattcatatcgtggtggcgacagtggcgttc
gggatggggatcaacaagcccaatgtccgcttcgtggtccattacgatatcccgcgcaat
atcgagtcttactaccaggaaaccggccgcgccgggcgtgacggcctgccggcggaagcg
gtcatgctgtatgatccgtccgatctggcctggttgcgccgctgcctggatgaaaaggcc
gacggggcccagaagcaggtcgagagtcacaagctcaacgccatgggcgcatttgctgaa
gcccagacctgccgccgccaggtgctgctgaactatttcggcgagtaccgggaagagccg
tgcggcaactgcgatatctgtctcgacccgcccaagcgctttgcggcgctggaagtggcg
caaaaagccctgtcctgtgtctaccgggtcaaccagcgcttcggggtcaaccacgtggtg
gacgtattgcgcgggatgcagaatcagcggatccgcgagctcggccatgacaagctgacc
acttatggcatcggccgcgagcacagccatgagttctgggtcagtatcctgcgccagctg
atccaccgtggctatctgatccagagtattgtccacagctcgacgctgcagttgaccgaa
aaagcccgggcgatcctgcgcgcggaagtcgcgctggagctggcggtgccgcggcttgat
atcgcgactcgcagcgccaagagcgataagctcgccaaccgccattacgacaagaagctg
tttgccaagctgcgtaaactacgtaaggcgattgccgatgaggaagatttgccaccgtac
gtggtgtttaacgatgccagcctgatggagatggcggagatcctgccgacttcgtctggt
gagctgctggccgtcaatggcgtcggccatcgcaagctggagaaatacggcgaggccttt
ctgaccctgattgaagagcacctgaccatcggcgacgaaacctattaa
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