KEGG   Photobacterium atrarenae: NNL38_16240
Entry
NNL38_16240       CDS       T10583                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pate  Photobacterium atrarenae
Pathway
pate03030  DNA replication
pate03430  Mismatch repair
pate03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pate00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NNL38_16240
   03430 Mismatch repair
    NNL38_16240
   03440 Homologous recombination
    NNL38_16240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pate03032]
    NNL38_16240
   03400 DNA repair and recombination proteins [BR:pate03400]
    NNL38_16240
Enzymes [BR:pate01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NNL38_16240
DNA replication proteins [BR:pate03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NNL38_16240
DNA repair and recombination proteins [BR:pate03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NNL38_16240
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like
Other DBs
NCBI-ProteinID: UTV30134
UniProt: A0ABY5GLZ8
LinkDB
Position
2:32030..32767
AA seq 245 aa
MFNTNTSSRLLTNHNTPDWPTFFTMLADQAKDQRLQHYYTAGMISGDTPLKDVPFVALDF
ETTGLDPKQDEIISIGLVPFDINRIRCRNSAQWFVNPNRPLEEESVVIHGITDSDVSRAP
ELLRILEEVLSALAGKIVVVHYRQIEREFMNSALKSRLNEGIRFPVVDTLAIESAIQHRK
FGGLWNKLKGNKPGSVRLGRCRQRYGLPIYPPHHALTDALATAELLQAQIAYHFDPETPI
SEIWL
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttaacaccaacacgtccagccggttactgaccaaccataatacgccggactggcca
accttctttaccatgctggcagaccaggccaaagaccagcgactgcaacactactataca
gccggtatgatcagcggtgatacaccgctaaaagacgtgccgtttgtcgcacttgacttt
gaaaccacaggattggatccgaaacaggatgagatcatcagtatcggcttggtgccgttt
gatatcaatcggatccggtgccggaattcggcgcaatggtttgttaatccaaaccggccg
cttgaagaagaatcagtcgtcattcatggtatcaccgattccgatgtcagccgggcaccg
gaattgttgcggatcctggaagaagtcctctctgccctggccggtaaaattgtggtcgtg
cactaccgccaaatcgagcgggaatttatgaacagtgctctcaagtccaggctcaatgaa
gggatccgctttccggttgtcgataccctggctatcgagtctgccatccagcatcgtaaa
ttcggcggcctgtggaataagctcaaaggcaataaacccgggtcggtccgtttaggtcga
tgtcggcaacgctatggtttaccgatttaccccccgcaccatgcactcacggatgcgctg
gcgacagccgaactgctgcaagcgcaaattgcctatcactttgatccagagacgcctatc
tccgagatatggctctag

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